Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC10.27□□□□□ -0.76
LITAFQ99732 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
LITAFQ99732 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
LITAFQ99732 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC10.27□□□□□ -0.76
LITAFQ99732 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC10.27□□□□□ -0.76
LITAFQ99732 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
LITAFQ99732 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
LITAFQ99732 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.76
LITAFQ99732 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
LITAFQ99732 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC10.27□□□□□ -0.77
LITAFQ99732 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
LITAFQ99732 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
LITAFQ99732 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
LITAFQ99732 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
LITAFQ99732 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
LITAFQ99732 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
LITAFQ99732 MX1-218ENST00000619682 1980 ntTSL 5 BASIC10.27□□□□□ -0.77
LITAFQ99732 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC10.27□□□□□ -0.77
LITAFQ99732 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC10.27□□□□□ -0.77
LITAFQ99732 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC10.27□□□□□ -0.77
LITAFQ99732 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC10.27□□□□□ -0.77
LITAFQ99732 FLJ16779-201ENST00000612722 7638 ntBASIC10.27□□□□□ -0.77
LITAFQ99732 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
LITAFQ99732 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC10.27□□□□□ -0.77
LITAFQ99732 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.77
LITAFQ99732 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
LITAFQ99732 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC10.27□□□□□ -0.77
LITAFQ99732 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC10.27□□□□□ -0.77
LITAFQ99732 CXCL1P1-201ENST00000502804 216 ntBASIC10.27□□□□□ -0.77
LITAFQ99732 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
LITAFQ99732 ETFA-208ENST00000559602 792 ntTSL 3 BASIC10.27□□□□□ -0.77
LITAFQ99732 AC024267.1-201ENST00000582320 895 ntBASIC10.27□□□□□ -0.77
LITAFQ99732 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC10.27□□□□□ -0.77
LITAFQ99732 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
LITAFQ99732 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC10.27□□□□□ -0.77
LITAFQ99732 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC10.27□□□□□ -0.77
LITAFQ99732 AL121956.5-201ENST00000625261 221 ntBASIC10.27□□□□□ -0.77
LITAFQ99732 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC10.27□□□□□ -0.77
LITAFQ99732 SDR16C5-202ENST00000396721 2399 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
LITAFQ99732 OSBPL2-201ENST00000313733 4009 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
LITAFQ99732 FFAR4-202ENST00000371483 3653 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
LITAFQ99732 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC10.27□□□□□ -0.77
LITAFQ99732 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC10.27□□□□□ -0.77
LITAFQ99732 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
LITAFQ99732 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
LITAFQ99732 TRIM10-204ENST00000449742 3546 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
LITAFQ99732 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC10.27□□□□□ -0.77
LITAFQ99732 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
LITAFQ99732 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
LITAFQ99732 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC10.27□□□□□ -0.77
LITAFQ99732 DRD2-201ENST00000346454 2433 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
LITAFQ99732 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC10.27□□□□□ -0.77
LITAFQ99732 RPS6KA2-204ENST00000481261 2297 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
LITAFQ99732 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC10.27□□□□□ -0.77
LITAFQ99732 KCP-203ENST00000610776 5108 ntTSL 5 BASIC10.27□□□□□ -0.77
LITAFQ99732 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
LITAFQ99732 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC10.27□□□□□ -0.77
LITAFQ99732 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC10.27□□□□□ -0.77
LITAFQ99732 ANO7-202ENST00000402430 2652 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.77
LITAFQ99732 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC10.27□□□□□ -0.77
LITAFQ99732 CCDC57-203ENST00000392343 2896 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.77
LITAFQ99732 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
LITAFQ99732 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC10.27□□□□□ -0.77
LITAFQ99732 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.77
LITAFQ99732 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
LITAFQ99732 SLC35C2-203ENST00000372227 2505 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
LITAFQ99732 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.77
LITAFQ99732 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC10.27□□□□□ -0.77
LITAFQ99732 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC10.27□□□□□ -0.77
LITAFQ99732 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
LITAFQ99732 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC10.26□□□□□ -0.77
LITAFQ99732 MVK-214ENST00000629016 1591 ntTSL 5 BASIC10.26□□□□□ -0.77
LITAFQ99732 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
LITAFQ99732 MTF2-202ENST00000370303 1951 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
LITAFQ99732 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
LITAFQ99732 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
LITAFQ99732 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
LITAFQ99732 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
LITAFQ99732 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
LITAFQ99732 SCNN1A-215ENST00000540037 3040 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
LITAFQ99732 C2-206ENST00000442278 2434 ntTSL 2 BASIC10.26□□□□□ -0.77
LITAFQ99732 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
LITAFQ99732 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
LITAFQ99732 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC10.26□□□□□ -0.77
LITAFQ99732 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC10.26□□□□□ -0.77
LITAFQ99732 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
LITAFQ99732 OSBPL5-201ENST00000263650 3889 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
LITAFQ99732 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
LITAFQ99732 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC10.26□□□□□ -0.77
LITAFQ99732 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
LITAFQ99732 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
LITAFQ99732 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
LITAFQ99732 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC10.26□□□□□ -0.77
LITAFQ99732 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
LITAFQ99732 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
LITAFQ99732 KDM8-212ENST00000568965 1655 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
LITAFQ99732 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
LITAFQ99732 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
LITAFQ99732 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
LITAFQ99732 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC10.26□□□□□ -0.77
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms