Protein–RNA interactions for Protein: Q96PG1

MS4A4E, Putative membrane-spanning 4-domains subfamily A member 4E, humanhuman

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A4EQ96PG1 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
MS4A4EQ96PG1 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
MS4A4EQ96PG1 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
MS4A4EQ96PG1 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC14.43□□□□□ -0.1
MS4A4EQ96PG1 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
MS4A4EQ96PG1 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
MS4A4EQ96PG1 GPI-205ENST00000586425 1799 ntTSL 5 BASIC14.42□□□□□ -0.1
MS4A4EQ96PG1 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC14.42□□□□□ -0.1
MS4A4EQ96PG1 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
MS4A4EQ96PG1 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
MS4A4EQ96PG1 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
MS4A4EQ96PG1 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC14.42□□□□□ -0.1
MS4A4EQ96PG1 AC104457.1-201ENST00000401024 814 ntBASIC14.42□□□□□ -0.1
MS4A4EQ96PG1 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC14.42□□□□□ -0.1
MS4A4EQ96PG1 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
MS4A4EQ96PG1 AL589987.1-201ENST00000453380 819 ntBASIC14.42□□□□□ -0.1
MS4A4EQ96PG1 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
MS4A4EQ96PG1 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
MS4A4EQ96PG1 CYMP-203ENST00000474680 1263 ntBASIC14.42□□□□□ -0.1
MS4A4EQ96PG1 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
MS4A4EQ96PG1 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC14.42□□□□□ -0.1
MS4A4EQ96PG1 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
MS4A4EQ96PG1 DUT-210ENST00000559935 569 ntTSL 3 BASIC14.42□□□□□ -0.1
MS4A4EQ96PG1 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
MS4A4EQ96PG1 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
MS4A4EQ96PG1 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
MS4A4EQ96PG1 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC14.42□□□□□ -0.1
MS4A4EQ96PG1 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC14.42□□□□□ -0.1
MS4A4EQ96PG1 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
MS4A4EQ96PG1 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
MS4A4EQ96PG1 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
MS4A4EQ96PG1 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
MS4A4EQ96PG1 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
MS4A4EQ96PG1 ZBTB45P1-201ENST00000452761 1456 ntBASIC14.42□□□□□ -0.1
MS4A4EQ96PG1 AC012508.2-201ENST00000567613 1472 ntBASIC14.42□□□□□ -0.1
MS4A4EQ96PG1 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
MS4A4EQ96PG1 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
MS4A4EQ96PG1 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
MS4A4EQ96PG1 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC14.42□□□□□ -0.1
MS4A4EQ96PG1 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
MS4A4EQ96PG1 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
MS4A4EQ96PG1 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
MS4A4EQ96PG1 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
MS4A4EQ96PG1 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
MS4A4EQ96PG1 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
MS4A4EQ96PG1 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
MS4A4EQ96PG1 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
MS4A4EQ96PG1 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
MS4A4EQ96PG1 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
MS4A4EQ96PG1 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
MS4A4EQ96PG1 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
MS4A4EQ96PG1 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
MS4A4EQ96PG1 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
MS4A4EQ96PG1 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC14.41□□□□□ -0.1
MS4A4EQ96PG1 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
MS4A4EQ96PG1 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
MS4A4EQ96PG1 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
MS4A4EQ96PG1 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
MS4A4EQ96PG1 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
MS4A4EQ96PG1 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
MS4A4EQ96PG1 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
MS4A4EQ96PG1 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC14.41□□□□□ -0.1
MS4A4EQ96PG1 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC14.41□□□□□ -0.1
MS4A4EQ96PG1 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC14.41□□□□□ -0.1
MS4A4EQ96PG1 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
MS4A4EQ96PG1 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC14.41□□□□□ -0.1
MS4A4EQ96PG1 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC14.41□□□□□ -0.1
MS4A4EQ96PG1 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
MS4A4EQ96PG1 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC14.41□□□□□ -0.1
MS4A4EQ96PG1 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC14.41□□□□□ -0.1
MS4A4EQ96PG1 RNA5-8SN1-201ENST00000610460 153 ntBASIC14.41□□□□□ -0.1
MS4A4EQ96PG1 RNA5-8SN5-202ENST00000612463 153 ntBASIC14.41□□□□□ -0.1
MS4A4EQ96PG1 RNA5-8SN4-201ENST00000613359 153 ntBASIC14.41□□□□□ -0.1
MS4A4EQ96PG1 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC14.41□□□□□ -0.1
MS4A4EQ96PG1 RNA5-8SN5-201ENST00000619471 153 ntBASIC14.41□□□□□ -0.1
MS4A4EQ96PG1 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC14.41□□□□□ -0.1
MS4A4EQ96PG1 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
MS4A4EQ96PG1 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
MS4A4EQ96PG1 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC14.41□□□□□ -0.1
MS4A4EQ96PG1 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
MS4A4EQ96PG1 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
MS4A4EQ96PG1 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
MS4A4EQ96PG1 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
MS4A4EQ96PG1 MARS-233ENST00000628866 2583 ntTSL 5 BASIC14.41□□□□□ -0.1
MS4A4EQ96PG1 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
MS4A4EQ96PG1 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC14.41□□□□□ -0.1
MS4A4EQ96PG1 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
MS4A4EQ96PG1 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
MS4A4EQ96PG1 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
MS4A4EQ96PG1 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC14.41□□□□□ -0.1
MS4A4EQ96PG1 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC14.41□□□□□ -0.1
MS4A4EQ96PG1 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
MS4A4EQ96PG1 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC14.41□□□□□ -0.1
MS4A4EQ96PG1 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
MS4A4EQ96PG1 REXO1L4P-201ENST00000605109 1937 ntBASIC14.41□□□□□ -0.1
MS4A4EQ96PG1 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
MS4A4EQ96PG1 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
MS4A4EQ96PG1 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
MS4A4EQ96PG1 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
MS4A4EQ96PG1 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms