Protein–RNA interactions for Protein: Q96M43

NBPF4, Neuroblastoma breakpoint family member 4, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NBPF4Q96M43 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC20.05■□□□□ 0.8
NBPF4Q96M43 RN7SL574P-201ENST00000581512 297 ntBASIC20.05■□□□□ 0.8
NBPF4Q96M43 HCG18-245ENST00000602550 559 ntTSL 4 BASIC20.05■□□□□ 0.8
NBPF4Q96M43 AL023803.2-201ENST00000620080 638 ntBASIC20.05■□□□□ 0.8
NBPF4Q96M43 AL162426.1-201ENST00000624141 743 ntBASIC20.05■□□□□ 0.8
NBPF4Q96M43 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC20.05■□□□□ 0.8
NBPF4Q96M43 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NBPF4Q96M43 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC20.05■□□□□ 0.8
NBPF4Q96M43 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC20.05■□□□□ 0.8
NBPF4Q96M43 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
NBPF4Q96M43 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC20.05■□□□□ 0.8
NBPF4Q96M43 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC20.05■□□□□ 0.8
NBPF4Q96M43 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
NBPF4Q96M43 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NBPF4Q96M43 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
NBPF4Q96M43 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NBPF4Q96M43 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
NBPF4Q96M43 BANP-204ENST00000393208 2283 ntTSL 2 BASIC20.05■□□□□ 0.8
NBPF4Q96M43 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
NBPF4Q96M43 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
NBPF4Q96M43 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NBPF4Q96M43 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NBPF4Q96M43 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
NBPF4Q96M43 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
NBPF4Q96M43 AC090616.6-203ENST00000579186 1945 ntBASIC20.04■□□□□ 0.8
NBPF4Q96M43 REXO1L4P-201ENST00000605109 1937 ntBASIC20.04■□□□□ 0.8
NBPF4Q96M43 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC20.04■□□□□ 0.8
NBPF4Q96M43 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC20.04■□□□□ 0.8
NBPF4Q96M43 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
NBPF4Q96M43 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NBPF4Q96M43 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
NBPF4Q96M43 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NBPF4Q96M43 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC20.04■□□□□ 0.8
NBPF4Q96M43 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
NBPF4Q96M43 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NBPF4Q96M43 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NBPF4Q96M43 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NBPF4Q96M43 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NBPF4Q96M43 NPPA-201ENST00000376476 728 ntTSL 3 BASIC20.04■□□□□ 0.8
NBPF4Q96M43 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
NBPF4Q96M43 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
NBPF4Q96M43 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC20.04■□□□□ 0.8
NBPF4Q96M43 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC20.04■□□□□ 0.8
NBPF4Q96M43 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC20.04■□□□□ 0.8
NBPF4Q96M43 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC20.04■□□□□ 0.8
NBPF4Q96M43 EID1-202ENST00000560490 584 ntTSL 3 BASIC20.04■□□□□ 0.8
NBPF4Q96M43 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC20.04■□□□□ 0.8
NBPF4Q96M43 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
NBPF4Q96M43 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
NBPF4Q96M43 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC20.04■□□□□ 0.8
NBPF4Q96M43 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
NBPF4Q96M43 AC008132.1-202ENST00000342005 1389 ntBASIC20.04■□□□□ 0.8
NBPF4Q96M43 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NBPF4Q96M43 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
NBPF4Q96M43 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
NBPF4Q96M43 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NBPF4Q96M43 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
NBPF4Q96M43 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC20.04■□□□□ 0.8
NBPF4Q96M43 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
NBPF4Q96M43 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NBPF4Q96M43 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC20.03■□□□□ 0.8
NBPF4Q96M43 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC20.03■□□□□ 0.8
NBPF4Q96M43 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC20.03■□□□□ 0.8
NBPF4Q96M43 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
NBPF4Q96M43 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
NBPF4Q96M43 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
NBPF4Q96M43 AC020910.5-201ENST00000623668 1865 ntBASIC20.03■□□□□ 0.8
NBPF4Q96M43 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
NBPF4Q96M43 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NBPF4Q96M43 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
NBPF4Q96M43 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
NBPF4Q96M43 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
NBPF4Q96M43 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC20.03■□□□□ 0.8
NBPF4Q96M43 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC20.03■□□□□ 0.8
NBPF4Q96M43 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
NBPF4Q96M43 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
NBPF4Q96M43 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC20.03■□□□□ 0.8
NBPF4Q96M43 GHSR-202ENST00000427970 912 ntBASIC20.03■□□□□ 0.8
NBPF4Q96M43 RN7SL720P-201ENST00000488178 304 ntBASIC20.03■□□□□ 0.8
NBPF4Q96M43 AC245884.6-201ENST00000515672 1067 ntBASIC20.03■□□□□ 0.8
NBPF4Q96M43 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC20.03■□□□□ 0.8
NBPF4Q96M43 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC20.03■□□□□ 0.8
NBPF4Q96M43 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
NBPF4Q96M43 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC20.03■□□□□ 0.8
NBPF4Q96M43 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC20.03■□□□□ 0.8
NBPF4Q96M43 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC20.03■□□□□ 0.8
NBPF4Q96M43 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
NBPF4Q96M43 AC009955.4-201ENST00000597192 544 ntBASIC20.03■□□□□ 0.8
NBPF4Q96M43 CU633904.3-201ENST00000624042 1029 ntBASIC20.03■□□□□ 0.8
NBPF4Q96M43 PCBP2-OT1-201ENST00000634357 590 ntBASIC20.03■□□□□ 0.8
NBPF4Q96M43 AC004923.1-202ENST00000642106 209 ntBASIC20.03■□□□□ 0.8
NBPF4Q96M43 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NBPF4Q96M43 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NBPF4Q96M43 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
NBPF4Q96M43 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NBPF4Q96M43 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
NBPF4Q96M43 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NBPF4Q96M43 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
NBPF4Q96M43 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
NBPF4Q96M43 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms