Protein–RNA interactions for Protein: Q96IS3

RAX2, Retina and anterior neural fold homeobox protein 2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAX2Q96IS3 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC12.12□□□□□ -0.47
RAX2Q96IS3 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC12.12□□□□□ -0.47
RAX2Q96IS3 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC12.12□□□□□ -0.47
RAX2Q96IS3 NOP2-220ENST00000545915 630 ntTSL 2 BASIC12.12□□□□□ -0.47
RAX2Q96IS3 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
RAX2Q96IS3 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC12.12□□□□□ -0.47
RAX2Q96IS3 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC12.12□□□□□ -0.47
RAX2Q96IS3 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC12.12□□□□□ -0.47
RAX2Q96IS3 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC12.12□□□□□ -0.47
RAX2Q96IS3 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
RAX2Q96IS3 AL008721.1-201ENST00000609964 604 ntBASIC12.12□□□□□ -0.47
RAX2Q96IS3 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
RAX2Q96IS3 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC12.12□□□□□ -0.47
RAX2Q96IS3 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC12.12□□□□□ -0.47
RAX2Q96IS3 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
RAX2Q96IS3 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC12.12□□□□□ -0.47
RAX2Q96IS3 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
RAX2Q96IS3 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
RAX2Q96IS3 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
RAX2Q96IS3 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC12.12□□□□□ -0.47
RAX2Q96IS3 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC12.12□□□□□ -0.47
RAX2Q96IS3 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
RAX2Q96IS3 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC12.12□□□□□ -0.47
RAX2Q96IS3 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC12.12□□□□□ -0.47
RAX2Q96IS3 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
RAX2Q96IS3 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
RAX2Q96IS3 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
RAX2Q96IS3 MPLKIP-201ENST00000306984 7668 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
RAX2Q96IS3 DBET-201ENST00000630918 3363 ntBASIC12.12□□□□□ -0.47
RAX2Q96IS3 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
RAX2Q96IS3 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC12.11□□□□□ -0.47
RAX2Q96IS3 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC12.11□□□□□ -0.47
RAX2Q96IS3 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
RAX2Q96IS3 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
RAX2Q96IS3 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC12.11□□□□□ -0.47
RAX2Q96IS3 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
RAX2Q96IS3 AC011477.6-201ENST00000604980 1927 ntBASIC12.11□□□□□ -0.47
RAX2Q96IS3 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
RAX2Q96IS3 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC12.11□□□□□ -0.47
RAX2Q96IS3 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC12.11□□□□□ -0.47
RAX2Q96IS3 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC12.11□□□□□ -0.47
RAX2Q96IS3 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
RAX2Q96IS3 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
RAX2Q96IS3 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
RAX2Q96IS3 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
RAX2Q96IS3 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
RAX2Q96IS3 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
RAX2Q96IS3 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
RAX2Q96IS3 BANP-204ENST00000393208 2283 ntTSL 2 BASIC12.11□□□□□ -0.47
RAX2Q96IS3 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC12.11□□□□□ -0.47
RAX2Q96IS3 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC12.11□□□□□ -0.47
RAX2Q96IS3 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
RAX2Q96IS3 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
RAX2Q96IS3 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
RAX2Q96IS3 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
RAX2Q96IS3 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
RAX2Q96IS3 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
RAX2Q96IS3 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
RAX2Q96IS3 MXI1-205ENST00000393134 889 ntTSL 2 BASIC12.11□□□□□ -0.47
RAX2Q96IS3 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
RAX2Q96IS3 ARSEP1-201ENST00000420443 635 ntBASIC12.11□□□□□ -0.47
RAX2Q96IS3 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC12.11□□□□□ -0.47
RAX2Q96IS3 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC12.11□□□□□ -0.47
RAX2Q96IS3 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC12.11□□□□□ -0.47
RAX2Q96IS3 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC12.11□□□□□ -0.47
RAX2Q96IS3 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
RAX2Q96IS3 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC12.11□□□□□ -0.47
RAX2Q96IS3 PAM16-204ENST00000571941 674 ntTSL 3 BASIC12.11□□□□□ -0.47
RAX2Q96IS3 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC12.11□□□□□ -0.47
RAX2Q96IS3 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC12.11□□□□□ -0.47
RAX2Q96IS3 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
RAX2Q96IS3 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC12.11□□□□□ -0.47
RAX2Q96IS3 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
RAX2Q96IS3 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
RAX2Q96IS3 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
RAX2Q96IS3 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC12.11□□□□□ -0.47
RAX2Q96IS3 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC12.11□□□□□ -0.47
RAX2Q96IS3 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
RAX2Q96IS3 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
RAX2Q96IS3 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC12.11□□□□□ -0.47
RAX2Q96IS3 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
RAX2Q96IS3 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC12.11□□□□□ -0.47
RAX2Q96IS3 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC12.11□□□□□ -0.47
RAX2Q96IS3 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
RAX2Q96IS3 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
RAX2Q96IS3 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
RAX2Q96IS3 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC12.11□□□□□ -0.47
RAX2Q96IS3 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC12.11□□□□□ -0.47
RAX2Q96IS3 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
RAX2Q96IS3 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
RAX2Q96IS3 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
RAX2Q96IS3 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
RAX2Q96IS3 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
RAX2Q96IS3 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
RAX2Q96IS3 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
RAX2Q96IS3 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC12.1□□□□□ -0.47
RAX2Q96IS3 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
RAX2Q96IS3 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
RAX2Q96IS3 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
RAX2Q96IS3 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 288.2 ms