Protein–RNA interactions for Protein: Q93008

USP9X, Probable ubiquitin carboxyl-terminal hydrolase FAF-X, humanhuman

Predicted RBP Predictions only

Length 2,570 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP9XQ93008 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
USP9XQ93008 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
USP9XQ93008 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
USP9XQ93008 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
USP9XQ93008 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
USP9XQ93008 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
USP9XQ93008 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
USP9XQ93008 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
USP9XQ93008 MRPS28-201ENST00000276585 850 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
USP9XQ93008 LAIR2-201ENST00000301202 699 ntAPPRIS P4 TSL 1 (best) BASIC13.2□□□□□ -0.3
USP9XQ93008 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
USP9XQ93008 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC13.2□□□□□ -0.3
USP9XQ93008 BCAS2P2-201ENST00000425064 674 ntBASIC13.2□□□□□ -0.3
USP9XQ93008 KRT17P4-201ENST00000429445 819 ntBASIC13.2□□□□□ -0.3
USP9XQ93008 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
USP9XQ93008 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC13.2□□□□□ -0.3
USP9XQ93008 AP000911.2-201ENST00000534330 502 ntBASIC13.2□□□□□ -0.3
USP9XQ93008 AL355916.2-201ENST00000556543 593 ntTSL 4 BASIC13.2□□□□□ -0.3
USP9XQ93008 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC13.2□□□□□ -0.3
USP9XQ93008 FAM227B-212ENST00000561064 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
USP9XQ93008 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
USP9XQ93008 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
USP9XQ93008 ALOX12P2-203ENST00000570921 1945 ntBASIC13.19□□□□□ -0.3
USP9XQ93008 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
USP9XQ93008 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
USP9XQ93008 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC13.19□□□□□ -0.3
USP9XQ93008 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
USP9XQ93008 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
USP9XQ93008 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
USP9XQ93008 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
USP9XQ93008 TSPY25P-201ENST00000429463 745 ntBASIC13.19□□□□□ -0.3
USP9XQ93008 AC092638.2-201ENST00000441105 947 ntBASIC13.19□□□□□ -0.3
USP9XQ93008 AC022616.1-201ENST00000518688 554 ntBASIC13.19□□□□□ -0.3
USP9XQ93008 CCNC-217ENST00000523985 958 ntTSL 2 BASIC13.19□□□□□ -0.3
USP9XQ93008 AC140847.2-201ENST00000545923 501 ntTSL 3 BASIC13.19□□□□□ -0.3
USP9XQ93008 LINC01224-201ENST00000593573 798 ntTSL 4 BASIC13.19□□□□□ -0.3
USP9XQ93008 AL109837.1-201ENST00000603272 613 ntBASIC13.19□□□□□ -0.3
USP9XQ93008 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
USP9XQ93008 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC13.19□□□□□ -0.3
USP9XQ93008 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
USP9XQ93008 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC13.19□□□□□ -0.3
USP9XQ93008 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
USP9XQ93008 E2F3P2-201ENST00000447755 1422 ntBASIC13.19□□□□□ -0.3
USP9XQ93008 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
USP9XQ93008 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
USP9XQ93008 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
USP9XQ93008 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
USP9XQ93008 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC13.19□□□□□ -0.3
USP9XQ93008 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
USP9XQ93008 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
USP9XQ93008 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
USP9XQ93008 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
USP9XQ93008 RPL14-203ENST00000416518 812 ntTSL 3 BASIC13.19□□□□□ -0.3
USP9XQ93008 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC13.19□□□□□ -0.3
USP9XQ93008 RBPMSLP-201ENST00000433427 502 ntBASIC13.19□□□□□ -0.3
USP9XQ93008 AC107463.1-201ENST00000508605 667 ntTSL 3 BASIC13.19□□□□□ -0.3
USP9XQ93008 AC090857.1-201ENST00000527400 390 ntBASIC13.19□□□□□ -0.3
USP9XQ93008 CR383656.3-201ENST00000551315 183 ntBASIC13.19□□□□□ -0.3
USP9XQ93008 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC13.19□□□□□ -0.3
USP9XQ93008 TPM1-220ENST00000559556 977 ntAPPRIS ALT1 TSL 2 BASIC13.19□□□□□ -0.3
USP9XQ93008 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC13.19□□□□□ -0.3
USP9XQ93008 LINC01569-203ENST00000573268 694 ntTSL 3 BASIC13.19□□□□□ -0.3
USP9XQ93008 AC084781.1-201ENST00000613737 656 ntBASIC13.19□□□□□ -0.3
USP9XQ93008 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC13.19□□□□□ -0.3
USP9XQ93008 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
USP9XQ93008 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
USP9XQ93008 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
USP9XQ93008 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC13.18□□□□□ -0.3
USP9XQ93008 RELL1-201ENST00000314117 1326 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
USP9XQ93008 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
USP9XQ93008 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
USP9XQ93008 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
USP9XQ93008 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
USP9XQ93008 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC13.18□□□□□ -0.3
USP9XQ93008 LINC02021-201ENST00000504808 1608 ntTSL 3 BASIC13.18□□□□□ -0.3
USP9XQ93008 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
USP9XQ93008 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC13.18□□□□□ -0.3
USP9XQ93008 VCX3A-202ENST00000398729 808 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
USP9XQ93008 TRPM2-AS-201ENST00000423310 586 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
USP9XQ93008 AC114763.1-201ENST00000431985 928 ntTSL 2 BASIC13.18□□□□□ -0.3
USP9XQ93008 IZUMO1R-202ENST00000440961 805 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
USP9XQ93008 PUDPP3-201ENST00000445368 636 ntBASIC13.18□□□□□ -0.3
USP9XQ93008 AC105390.1-201ENST00000511330 560 ntTSL 4 BASIC13.18□□□□□ -0.3
USP9XQ93008 DUX4L47-201ENST00000566374 394 ntBASIC13.18□□□□□ -0.3
USP9XQ93008 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC13.18□□□□□ -0.3
USP9XQ93008 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC13.18□□□□□ -0.3
USP9XQ93008 PSME2-217ENST00000615264 874 ntTSL 5 BASIC13.18□□□□□ -0.3
USP9XQ93008 PSME2-218ENST00000630027 185 ntTSL 3 BASIC13.18□□□□□ -0.3
USP9XQ93008 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
USP9XQ93008 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
USP9XQ93008 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
USP9XQ93008 CCDC169-SOHLH2-201ENST00000511166 2051 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
USP9XQ93008 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
USP9XQ93008 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
USP9XQ93008 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
USP9XQ93008 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
USP9XQ93008 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
USP9XQ93008 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC13.18□□□□□ -0.3
USP9XQ93008 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
USP9XQ93008 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms