Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 GOLGA8DP-202ENST00000341390 2184 ntBASIC17.58■□□□□ 0.4
ERCC4Q92889 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
ERCC4Q92889 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC17.58■□□□□ 0.4
ERCC4Q92889 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC17.58■□□□□ 0.4
ERCC4Q92889 AL627223.1-201ENST00000416693 442 ntBASIC17.58■□□□□ 0.4
ERCC4Q92889 RBPMS2P1-201ENST00000437762 623 ntBASIC17.58■□□□□ 0.4
ERCC4Q92889 TARDBPP1-201ENST00000442013 1203 ntBASIC17.58■□□□□ 0.4
ERCC4Q92889 SPDYE14P-201ENST00000442619 822 ntBASIC17.58■□□□□ 0.4
ERCC4Q92889 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC17.58■□□□□ 0.4
ERCC4Q92889 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC17.58■□□□□ 0.4
ERCC4Q92889 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC17.58■□□□□ 0.4
ERCC4Q92889 SUOX-214ENST00000551841 906 ntTSL 3 BASIC17.58■□□□□ 0.4
ERCC4Q92889 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC17.58■□□□□ 0.4
ERCC4Q92889 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.4
ERCC4Q92889 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
ERCC4Q92889 AL513210.1-201ENST00000629608 234 ntBASIC17.58■□□□□ 0.4
ERCC4Q92889 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
ERCC4Q92889 REXO1L2P-201ENST00000425429 2069 ntBASIC17.58■□□□□ 0.4
ERCC4Q92889 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
ERCC4Q92889 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
ERCC4Q92889 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
ERCC4Q92889 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
ERCC4Q92889 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
ERCC4Q92889 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
ERCC4Q92889 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
ERCC4Q92889 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
ERCC4Q92889 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC17.58■□□□□ 0.4
ERCC4Q92889 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC17.58■□□□□ 0.4
ERCC4Q92889 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC17.58■□□□□ 0.4
ERCC4Q92889 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
ERCC4Q92889 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
ERCC4Q92889 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
ERCC4Q92889 LINC01230-201ENST00000625222 3017 ntBASIC17.58■□□□□ 0.4
ERCC4Q92889 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
ERCC4Q92889 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC17.57■□□□□ 0.4
ERCC4Q92889 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ERCC4Q92889 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ERCC4Q92889 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ERCC4Q92889 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ERCC4Q92889 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ERCC4Q92889 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ERCC4Q92889 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
ERCC4Q92889 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
ERCC4Q92889 ACE3P-201ENST00000423435 1973 ntBASIC17.57■□□□□ 0.4
ERCC4Q92889 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC17.57■□□□□ 0.4
ERCC4Q92889 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
ERCC4Q92889 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ERCC4Q92889 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ERCC4Q92889 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
ERCC4Q92889 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ERCC4Q92889 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC17.57■□□□□ 0.4
ERCC4Q92889 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC17.57■□□□□ 0.4
ERCC4Q92889 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ERCC4Q92889 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC17.57■□□□□ 0.4
ERCC4Q92889 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC17.57■□□□□ 0.4
ERCC4Q92889 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
ERCC4Q92889 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ERCC4Q92889 STOM-202ENST00000347359 870 ntTSL 2 BASIC17.57■□□□□ 0.4
ERCC4Q92889 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
ERCC4Q92889 AC074338.1-201ENST00000416825 156 ntBASIC17.57■□□□□ 0.4
ERCC4Q92889 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC17.57■□□□□ 0.4
ERCC4Q92889 KRT18P64-201ENST00000434946 1219 ntBASIC17.57■□□□□ 0.4
ERCC4Q92889 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ERCC4Q92889 AC005829.1-201ENST00000570002 483 ntBASIC17.57■□□□□ 0.4
ERCC4Q92889 AC055717.3-201ENST00000622967 595 ntBASIC17.57■□□□□ 0.4
ERCC4Q92889 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
ERCC4Q92889 RAB34-224ENST00000636513 888 ntTSL 5 BASIC17.57■□□□□ 0.4
ERCC4Q92889 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC17.57■□□□□ 0.4
ERCC4Q92889 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ERCC4Q92889 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ERCC4Q92889 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC17.57■□□□□ 0.4
ERCC4Q92889 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ERCC4Q92889 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
ERCC4Q92889 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ERCC4Q92889 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC17.57■□□□□ 0.4
ERCC4Q92889 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
ERCC4Q92889 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC17.57■□□□□ 0.4
ERCC4Q92889 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
ERCC4Q92889 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC17.57■□□□□ 0.4
ERCC4Q92889 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ERCC4Q92889 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
ERCC4Q92889 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
ERCC4Q92889 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC17.57■□□□□ 0.4
ERCC4Q92889 RDX-218ENST00000544551 4117 ntTSL 2 BASIC17.57■□□□□ 0.4
ERCC4Q92889 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ERCC4Q92889 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC17.57■□□□□ 0.4
ERCC4Q92889 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ERCC4Q92889 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ERCC4Q92889 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC17.56■□□□□ 0.4
ERCC4Q92889 AC140479.7-201ENST00000636301 2332 ntBASIC17.56■□□□□ 0.4
ERCC4Q92889 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ERCC4Q92889 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ERCC4Q92889 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC17.56■□□□□ 0.4
ERCC4Q92889 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
ERCC4Q92889 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC17.56■□□□□ 0.4
ERCC4Q92889 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ERCC4Q92889 AP000845.1-201ENST00000581677 2131 ntBASIC17.56■□□□□ 0.4
ERCC4Q92889 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ERCC4Q92889 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC17.56■□□□□ 0.4
ERCC4Q92889 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms