Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 PHKG1P2-201ENST00000457537 863 ntBASIC13.19□□□□□ -0.3
CLDND2Q8NHS1 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC13.19□□□□□ -0.3
CLDND2Q8NHS1 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC13.19□□□□□ -0.3
CLDND2Q8NHS1 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC13.19□□□□□ -0.3
CLDND2Q8NHS1 KRT17P8-201ENST00000540749 863 ntBASIC13.19□□□□□ -0.3
CLDND2Q8NHS1 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CLDND2Q8NHS1 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC13.19□□□□□ -0.3
CLDND2Q8NHS1 AC017083.2-201ENST00000608069 979 ntBASIC13.19□□□□□ -0.3
CLDND2Q8NHS1 AL391069.4-201ENST00000609583 481 ntBASIC13.19□□□□□ -0.3
CLDND2Q8NHS1 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CLDND2Q8NHS1 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC13.19□□□□□ -0.3
CLDND2Q8NHS1 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC13.19□□□□□ -0.3
CLDND2Q8NHS1 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
CLDND2Q8NHS1 CICP24-201ENST00000605464 2705 ntBASIC13.19□□□□□ -0.3
CLDND2Q8NHS1 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
CLDND2Q8NHS1 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CLDND2Q8NHS1 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC13.19□□□□□ -0.3
CLDND2Q8NHS1 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
CLDND2Q8NHS1 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
CLDND2Q8NHS1 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC13.19□□□□□ -0.3
CLDND2Q8NHS1 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
CLDND2Q8NHS1 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CLDND2Q8NHS1 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
CLDND2Q8NHS1 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CLDND2Q8NHS1 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CLDND2Q8NHS1 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CLDND2Q8NHS1 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
CLDND2Q8NHS1 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
CLDND2Q8NHS1 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CLDND2Q8NHS1 SSR4P1-203ENST00000599569 2260 ntBASIC13.19□□□□□ -0.3
CLDND2Q8NHS1 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC13.19□□□□□ -0.3
CLDND2Q8NHS1 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
CLDND2Q8NHS1 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
CLDND2Q8NHS1 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
CLDND2Q8NHS1 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CLDND2Q8NHS1 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC13.18□□□□□ -0.3
CLDND2Q8NHS1 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CLDND2Q8NHS1 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC13.18□□□□□ -0.3
CLDND2Q8NHS1 REXO1L1P-202ENST00000608646 1974 ntBASIC13.18□□□□□ -0.3
CLDND2Q8NHS1 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CLDND2Q8NHS1 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
CLDND2Q8NHS1 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CLDND2Q8NHS1 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
CLDND2Q8NHS1 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC13.18□□□□□ -0.3
CLDND2Q8NHS1 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CLDND2Q8NHS1 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
CLDND2Q8NHS1 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC13.18□□□□□ -0.3
CLDND2Q8NHS1 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
CLDND2Q8NHS1 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC13.18□□□□□ -0.3
CLDND2Q8NHS1 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
CLDND2Q8NHS1 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
CLDND2Q8NHS1 AC079776.1-201ENST00000401540 1152 ntBASIC13.18□□□□□ -0.3
CLDND2Q8NHS1 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC13.18□□□□□ -0.3
CLDND2Q8NHS1 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
CLDND2Q8NHS1 TMEM14DP-201ENST00000422205 345 ntBASIC13.18□□□□□ -0.3
CLDND2Q8NHS1 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC13.18□□□□□ -0.3
CLDND2Q8NHS1 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC13.18□□□□□ -0.3
CLDND2Q8NHS1 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC13.18□□□□□ -0.3
CLDND2Q8NHS1 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC13.18□□□□□ -0.3
CLDND2Q8NHS1 USP40-206ENST00000443711 628 ntTSL 2 BASIC13.18□□□□□ -0.3
CLDND2Q8NHS1 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC13.18□□□□□ -0.3
CLDND2Q8NHS1 ACA64.2-201ENST00000459014 129 ntBASIC13.18□□□□□ -0.3
CLDND2Q8NHS1 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC13.18□□□□□ -0.3
CLDND2Q8NHS1 FUZ-207ENST00000526575 482 ntTSL 4 BASIC13.18□□□□□ -0.3
CLDND2Q8NHS1 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC13.18□□□□□ -0.3
CLDND2Q8NHS1 RAB43P1-201ENST00000561790 589 ntBASIC13.18□□□□□ -0.3
CLDND2Q8NHS1 AC106886.1-201ENST00000568660 600 ntBASIC13.18□□□□□ -0.3
CLDND2Q8NHS1 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC13.18□□□□□ -0.3
CLDND2Q8NHS1 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
CLDND2Q8NHS1 AL450472.2-201ENST00000603663 1156 ntBASIC13.18□□□□□ -0.3
CLDND2Q8NHS1 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
CLDND2Q8NHS1 MIR6752-201ENST00000618442 71 ntBASIC13.18□□□□□ -0.3
CLDND2Q8NHS1 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC13.18□□□□□ -0.3
CLDND2Q8NHS1 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
CLDND2Q8NHS1 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CLDND2Q8NHS1 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC13.18□□□□□ -0.3
CLDND2Q8NHS1 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CLDND2Q8NHS1 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CLDND2Q8NHS1 CICP4-201ENST00000447359 2812 ntBASIC13.18□□□□□ -0.3
CLDND2Q8NHS1 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CLDND2Q8NHS1 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC13.18□□□□□ -0.3
CLDND2Q8NHS1 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CLDND2Q8NHS1 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC13.18□□□□□ -0.3
CLDND2Q8NHS1 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
CLDND2Q8NHS1 POLL-206ENST00000370172 2308 ntTSL 2 BASIC13.18□□□□□ -0.3
CLDND2Q8NHS1 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CLDND2Q8NHS1 AC104581.4-201ENST00000623126 3052 ntBASIC13.18□□□□□ -0.3
CLDND2Q8NHS1 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CLDND2Q8NHS1 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CLDND2Q8NHS1 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC13.18□□□□□ -0.3
CLDND2Q8NHS1 AC007292.2-201ENST00000593524 1812 ntBASIC13.18□□□□□ -0.3
CLDND2Q8NHS1 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CLDND2Q8NHS1 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CLDND2Q8NHS1 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CLDND2Q8NHS1 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC13.17□□□□□ -0.3
CLDND2Q8NHS1 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CLDND2Q8NHS1 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CLDND2Q8NHS1 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC13.17□□□□□ -0.3
CLDND2Q8NHS1 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CLDND2Q8NHS1 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms