Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 AL109954.1-202ENST00000564051 2148 ntBASIC14.62□□□□□ -0.07
SIMC1Q8NDZ2 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
SIMC1Q8NDZ2 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC14.62□□□□□ -0.07
SIMC1Q8NDZ2 POLL-217ENST00000628479 1953 ntTSL 5 BASIC14.62□□□□□ -0.07
SIMC1Q8NDZ2 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SIMC1Q8NDZ2 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC14.62□□□□□ -0.07
SIMC1Q8NDZ2 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SIMC1Q8NDZ2 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
SIMC1Q8NDZ2 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
SIMC1Q8NDZ2 TP73-209ENST00000603362 1668 ntTSL 5 BASIC14.61□□□□□ -0.07
SIMC1Q8NDZ2 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
SIMC1Q8NDZ2 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SIMC1Q8NDZ2 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
SIMC1Q8NDZ2 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SIMC1Q8NDZ2 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SIMC1Q8NDZ2 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SIMC1Q8NDZ2 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SIMC1Q8NDZ2 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SIMC1Q8NDZ2 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
SIMC1Q8NDZ2 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
SIMC1Q8NDZ2 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC14.61□□□□□ -0.07
SIMC1Q8NDZ2 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SIMC1Q8NDZ2 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC14.61□□□□□ -0.07
SIMC1Q8NDZ2 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
SIMC1Q8NDZ2 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SIMC1Q8NDZ2 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SIMC1Q8NDZ2 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC14.61□□□□□ -0.07
SIMC1Q8NDZ2 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC14.61□□□□□ -0.07
SIMC1Q8NDZ2 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC14.61□□□□□ -0.07
SIMC1Q8NDZ2 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SIMC1Q8NDZ2 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
SIMC1Q8NDZ2 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SIMC1Q8NDZ2 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
SIMC1Q8NDZ2 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SIMC1Q8NDZ2 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
SIMC1Q8NDZ2 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC14.61□□□□□ -0.07
SIMC1Q8NDZ2 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC14.61□□□□□ -0.07
SIMC1Q8NDZ2 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
SIMC1Q8NDZ2 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC14.61□□□□□ -0.07
SIMC1Q8NDZ2 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC14.61□□□□□ -0.07
SIMC1Q8NDZ2 TAF8-206ENST00000472818 719 ntTSL 2 BASIC14.61□□□□□ -0.07
SIMC1Q8NDZ2 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
SIMC1Q8NDZ2 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC14.61□□□□□ -0.07
SIMC1Q8NDZ2 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC14.61□□□□□ -0.07
SIMC1Q8NDZ2 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC14.61□□□□□ -0.07
SIMC1Q8NDZ2 ARL16-202ENST00000570561 768 ntTSL 2 BASIC14.61□□□□□ -0.07
SIMC1Q8NDZ2 AC138761.1-201ENST00000584393 385 ntBASIC14.61□□□□□ -0.07
SIMC1Q8NDZ2 AMT-224ENST00000635808 1610 ntTSL 5 BASIC14.61□□□□□ -0.07
SIMC1Q8NDZ2 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC14.61□□□□□ -0.07
SIMC1Q8NDZ2 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SIMC1Q8NDZ2 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
SIMC1Q8NDZ2 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
SIMC1Q8NDZ2 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
SIMC1Q8NDZ2 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
SIMC1Q8NDZ2 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
SIMC1Q8NDZ2 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC14.61□□□□□ -0.07
SIMC1Q8NDZ2 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SIMC1Q8NDZ2 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SIMC1Q8NDZ2 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC14.61□□□□□ -0.07
SIMC1Q8NDZ2 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC14.61□□□□□ -0.07
SIMC1Q8NDZ2 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC14.61□□□□□ -0.07
SIMC1Q8NDZ2 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
SIMC1Q8NDZ2 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC14.61□□□□□ -0.07
SIMC1Q8NDZ2 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC14.61□□□□□ -0.07
SIMC1Q8NDZ2 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
SIMC1Q8NDZ2 AC005252.3-201ENST00000623855 2258 ntBASIC14.61□□□□□ -0.07
SIMC1Q8NDZ2 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC14.6□□□□□ -0.07
SIMC1Q8NDZ2 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SIMC1Q8NDZ2 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
SIMC1Q8NDZ2 TDG-209ENST00000544861 1387 ntTSL 2 BASIC14.6□□□□□ -0.07
SIMC1Q8NDZ2 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
SIMC1Q8NDZ2 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SIMC1Q8NDZ2 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC14.6□□□□□ -0.07
SIMC1Q8NDZ2 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC14.6□□□□□ -0.07
SIMC1Q8NDZ2 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
SIMC1Q8NDZ2 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC14.6□□□□□ -0.07
SIMC1Q8NDZ2 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
SIMC1Q8NDZ2 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SIMC1Q8NDZ2 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SIMC1Q8NDZ2 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
SIMC1Q8NDZ2 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
SIMC1Q8NDZ2 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC14.6□□□□□ -0.07
SIMC1Q8NDZ2 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
SIMC1Q8NDZ2 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
SIMC1Q8NDZ2 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
SIMC1Q8NDZ2 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
SIMC1Q8NDZ2 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC14.6□□□□□ -0.07
SIMC1Q8NDZ2 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SIMC1Q8NDZ2 CICP11-201ENST00000434745 2827 ntBASIC14.6□□□□□ -0.07
SIMC1Q8NDZ2 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
SIMC1Q8NDZ2 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC14.6□□□□□ -0.07
SIMC1Q8NDZ2 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
SIMC1Q8NDZ2 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
SIMC1Q8NDZ2 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC14.6□□□□□ -0.07
SIMC1Q8NDZ2 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC14.6□□□□□ -0.07
SIMC1Q8NDZ2 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC14.6□□□□□ -0.07
SIMC1Q8NDZ2 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC14.6□□□□□ -0.07
SIMC1Q8NDZ2 INGX-202ENST00000489074 768 ntBASIC14.6□□□□□ -0.07
SIMC1Q8NDZ2 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC14.6□□□□□ -0.07
SIMC1Q8NDZ2 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC14.6□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms