Protein–RNA interactions for Protein: Q8N9L1

ZIC4, Zinc finger protein ZIC 4, humanhuman

Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4Q8N9L1 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC13.62□□□□□ -0.23
ZIC4Q8N9L1 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
ZIC4Q8N9L1 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC13.62□□□□□ -0.23
ZIC4Q8N9L1 AP001582.1-201ENST00000525856 295 ntBASIC13.62□□□□□ -0.23
ZIC4Q8N9L1 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC13.62□□□□□ -0.23
ZIC4Q8N9L1 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC13.62□□□□□ -0.23
ZIC4Q8N9L1 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
ZIC4Q8N9L1 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC13.62□□□□□ -0.23
ZIC4Q8N9L1 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC13.62□□□□□ -0.23
ZIC4Q8N9L1 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC13.62□□□□□ -0.23
ZIC4Q8N9L1 SERF2-217ENST00000630046 862 ntTSL 5 BASIC13.62□□□□□ -0.23
ZIC4Q8N9L1 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC13.62□□□□□ -0.23
ZIC4Q8N9L1 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
ZIC4Q8N9L1 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC13.62□□□□□ -0.23
ZIC4Q8N9L1 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
ZIC4Q8N9L1 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC13.62□□□□□ -0.23
ZIC4Q8N9L1 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ZIC4Q8N9L1 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
ZIC4Q8N9L1 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
ZIC4Q8N9L1 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
ZIC4Q8N9L1 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ZIC4Q8N9L1 MYB-201ENST00000316528 3571 ntTSL 5 BASIC13.62□□□□□ -0.23
ZIC4Q8N9L1 MYB-241ENST00000616088 3573 ntTSL 5 BASIC13.62□□□□□ -0.23
ZIC4Q8N9L1 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC13.62□□□□□ -0.23
ZIC4Q8N9L1 REXO1L2P-201ENST00000425429 2069 ntBASIC13.62□□□□□ -0.23
ZIC4Q8N9L1 AGAP7P-201ENST00000582299 2062 ntBASIC13.62□□□□□ -0.23
ZIC4Q8N9L1 AGAP14-201ENST00000624701 2060 ntBASIC13.62□□□□□ -0.23
ZIC4Q8N9L1 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC13.62□□□□□ -0.23
ZIC4Q8N9L1 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
ZIC4Q8N9L1 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
ZIC4Q8N9L1 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC13.62□□□□□ -0.23
ZIC4Q8N9L1 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ZIC4Q8N9L1 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC13.61□□□□□ -0.23
ZIC4Q8N9L1 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC13.61□□□□□ -0.23
ZIC4Q8N9L1 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ZIC4Q8N9L1 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
ZIC4Q8N9L1 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
ZIC4Q8N9L1 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC13.61□□□□□ -0.23
ZIC4Q8N9L1 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ZIC4Q8N9L1 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC13.61□□□□□ -0.23
ZIC4Q8N9L1 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC13.61□□□□□ -0.23
ZIC4Q8N9L1 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC13.61□□□□□ -0.23
ZIC4Q8N9L1 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
ZIC4Q8N9L1 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ZIC4Q8N9L1 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
ZIC4Q8N9L1 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
ZIC4Q8N9L1 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC13.61□□□□□ -0.23
ZIC4Q8N9L1 ACKR1-201ENST00000368121 1240 ntBASIC13.61□□□□□ -0.23
ZIC4Q8N9L1 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
ZIC4Q8N9L1 AL645937.2-201ENST00000396808 931 ntBASIC13.61□□□□□ -0.23
ZIC4Q8N9L1 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC13.61□□□□□ -0.23
ZIC4Q8N9L1 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
ZIC4Q8N9L1 PTPA-220ENST00000436883 532 ntTSL 4 BASIC13.61□□□□□ -0.23
ZIC4Q8N9L1 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC13.61□□□□□ -0.23
ZIC4Q8N9L1 RN7SL752P-201ENST00000463779 287 ntBASIC13.61□□□□□ -0.23
ZIC4Q8N9L1 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC13.61□□□□□ -0.23
ZIC4Q8N9L1 POLE2-203ENST00000553805 496 ntTSL 2 BASIC13.61□□□□□ -0.23
ZIC4Q8N9L1 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC13.61□□□□□ -0.23
ZIC4Q8N9L1 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC13.61□□□□□ -0.23
ZIC4Q8N9L1 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC13.61□□□□□ -0.23
ZIC4Q8N9L1 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
ZIC4Q8N9L1 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC13.61□□□□□ -0.23
ZIC4Q8N9L1 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
ZIC4Q8N9L1 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
ZIC4Q8N9L1 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC13.61□□□□□ -0.23
ZIC4Q8N9L1 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ZIC4Q8N9L1 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
ZIC4Q8N9L1 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
ZIC4Q8N9L1 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ZIC4Q8N9L1 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
ZIC4Q8N9L1 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
ZIC4Q8N9L1 TCAF2P1-201ENST00000291129 2421 ntBASIC13.61□□□□□ -0.23
ZIC4Q8N9L1 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC13.61□□□□□ -0.23
ZIC4Q8N9L1 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
ZIC4Q8N9L1 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC13.61□□□□□ -0.23
ZIC4Q8N9L1 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
ZIC4Q8N9L1 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ZIC4Q8N9L1 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
ZIC4Q8N9L1 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
ZIC4Q8N9L1 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC13.61□□□□□ -0.23
ZIC4Q8N9L1 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
ZIC4Q8N9L1 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ZIC4Q8N9L1 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ZIC4Q8N9L1 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ZIC4Q8N9L1 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC13.6□□□□□ -0.23
ZIC4Q8N9L1 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ZIC4Q8N9L1 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
ZIC4Q8N9L1 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ZIC4Q8N9L1 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ZIC4Q8N9L1 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
ZIC4Q8N9L1 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ZIC4Q8N9L1 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ZIC4Q8N9L1 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
ZIC4Q8N9L1 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ZIC4Q8N9L1 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
ZIC4Q8N9L1 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
ZIC4Q8N9L1 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ZIC4Q8N9L1 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
ZIC4Q8N9L1 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ZIC4Q8N9L1 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms