Protein–RNA interactions for Protein: Q8N5V2

NGEF, Ephexin-1, humanhuman

Predictions only

Length 710 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NGEFQ8N5V2 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NGEFQ8N5V2 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NGEFQ8N5V2 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
NGEFQ8N5V2 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC20.23■□□□□ 0.83
NGEFQ8N5V2 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
NGEFQ8N5V2 AC022210.1-201ENST00000449856 793 ntBASIC20.23■□□□□ 0.83
NGEFQ8N5V2 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC20.23■□□□□ 0.83
NGEFQ8N5V2 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
NGEFQ8N5V2 AC091951.1-201ENST00000512854 2465 ntBASIC20.23■□□□□ 0.83
NGEFQ8N5V2 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC20.23■□□□□ 0.83
NGEFQ8N5V2 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC20.23■□□□□ 0.83
NGEFQ8N5V2 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC20.23■□□□□ 0.83
NGEFQ8N5V2 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC20.23■□□□□ 0.83
NGEFQ8N5V2 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC20.23■□□□□ 0.83
NGEFQ8N5V2 APOC4-201ENST00000591600 348 ntTSL 3 BASIC20.23■□□□□ 0.83
NGEFQ8N5V2 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC20.23■□□□□ 0.83
NGEFQ8N5V2 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
NGEFQ8N5V2 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC20.23■□□□□ 0.83
NGEFQ8N5V2 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
NGEFQ8N5V2 AC107373.2-201ENST00000607735 490 ntBASIC20.23■□□□□ 0.83
NGEFQ8N5V2 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC20.23■□□□□ 0.83
NGEFQ8N5V2 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC20.23■□□□□ 0.83
NGEFQ8N5V2 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
NGEFQ8N5V2 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NGEFQ8N5V2 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NGEFQ8N5V2 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NGEFQ8N5V2 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NGEFQ8N5V2 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC20.23■□□□□ 0.83
NGEFQ8N5V2 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NGEFQ8N5V2 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
NGEFQ8N5V2 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC20.22■□□□□ 0.83
NGEFQ8N5V2 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NGEFQ8N5V2 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
NGEFQ8N5V2 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
NGEFQ8N5V2 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC20.22■□□□□ 0.83
NGEFQ8N5V2 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
NGEFQ8N5V2 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
NGEFQ8N5V2 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NGEFQ8N5V2 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NGEFQ8N5V2 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NGEFQ8N5V2 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC20.22■□□□□ 0.83
NGEFQ8N5V2 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NGEFQ8N5V2 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
NGEFQ8N5V2 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
NGEFQ8N5V2 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
NGEFQ8N5V2 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NGEFQ8N5V2 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NGEFQ8N5V2 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
NGEFQ8N5V2 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NGEFQ8N5V2 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC20.22■□□□□ 0.83
NGEFQ8N5V2 B9D1-203ENST00000395615 805 ntTSL 3 BASIC20.22■□□□□ 0.83
NGEFQ8N5V2 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC20.22■□□□□ 0.83
NGEFQ8N5V2 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
NGEFQ8N5V2 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
NGEFQ8N5V2 NAA38-206ENST00000576384 424 ntTSL 2 BASIC20.22■□□□□ 0.83
NGEFQ8N5V2 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
NGEFQ8N5V2 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC20.22■□□□□ 0.83
NGEFQ8N5V2 HYMAI-201ENST00000635591 3347 ntBASIC20.22■□□□□ 0.83
NGEFQ8N5V2 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
NGEFQ8N5V2 ACE3P-201ENST00000423435 1973 ntBASIC20.22■□□□□ 0.83
NGEFQ8N5V2 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NGEFQ8N5V2 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC20.22■□□□□ 0.83
NGEFQ8N5V2 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NGEFQ8N5V2 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
NGEFQ8N5V2 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NGEFQ8N5V2 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NGEFQ8N5V2 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
NGEFQ8N5V2 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NGEFQ8N5V2 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC20.22■□□□□ 0.83
NGEFQ8N5V2 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC20.22■□□□□ 0.83
NGEFQ8N5V2 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
NGEFQ8N5V2 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NGEFQ8N5V2 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NGEFQ8N5V2 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NGEFQ8N5V2 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NGEFQ8N5V2 AC013726.1-201ENST00000563747 2285 ntBASIC20.22■□□□□ 0.83
NGEFQ8N5V2 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NGEFQ8N5V2 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC20.21■□□□□ 0.83
NGEFQ8N5V2 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NGEFQ8N5V2 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NGEFQ8N5V2 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
NGEFQ8N5V2 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
NGEFQ8N5V2 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
NGEFQ8N5V2 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
NGEFQ8N5V2 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NGEFQ8N5V2 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NGEFQ8N5V2 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC20.21■□□□□ 0.83
NGEFQ8N5V2 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NGEFQ8N5V2 SNX29P1-201ENST00000548357 1007 ntBASIC20.21■□□□□ 0.83
NGEFQ8N5V2 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
NGEFQ8N5V2 AL359711.2-201ENST00000563105 872 ntBASIC20.21■□□□□ 0.83
NGEFQ8N5V2 RPSAP52-203ENST00000622976 1023 ntBASIC20.21■□□□□ 0.83
NGEFQ8N5V2 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
NGEFQ8N5V2 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
NGEFQ8N5V2 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
NGEFQ8N5V2 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
NGEFQ8N5V2 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC20.21■□□□□ 0.83
NGEFQ8N5V2 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NGEFQ8N5V2 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
NGEFQ8N5V2 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms