Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC15.84■□□□□ 0.13
SIX5Q8N196 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SIX5Q8N196 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SIX5Q8N196 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
SIX5Q8N196 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
SIX5Q8N196 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SIX5Q8N196 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC15.84■□□□□ 0.13
SIX5Q8N196 AL133267.1-201ENST00000398220 340 ntBASIC15.84■□□□□ 0.13
SIX5Q8N196 MPV17-204ENST00000399052 749 ntTSL 4 BASIC15.84■□□□□ 0.13
SIX5Q8N196 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC15.84■□□□□ 0.13
SIX5Q8N196 Z97180.1-201ENST00000445173 988 ntBASIC15.84■□□□□ 0.13
SIX5Q8N196 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC15.84■□□□□ 0.13
SIX5Q8N196 FTLP1-201ENST00000449155 526 ntBASIC15.84■□□□□ 0.13
SIX5Q8N196 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SIX5Q8N196 FGFR3P5-201ENST00000564496 886 ntBASIC15.84■□□□□ 0.13
SIX5Q8N196 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC15.84■□□□□ 0.13
SIX5Q8N196 AL353726.2-201ENST00000623259 884 ntBASIC15.84■□□□□ 0.13
SIX5Q8N196 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
SIX5Q8N196 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SIX5Q8N196 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
SIX5Q8N196 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
SIX5Q8N196 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
SIX5Q8N196 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC15.84■□□□□ 0.13
SIX5Q8N196 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
SIX5Q8N196 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SIX5Q8N196 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SIX5Q8N196 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
SIX5Q8N196 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
SIX5Q8N196 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
SIX5Q8N196 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
SIX5Q8N196 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
SIX5Q8N196 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.13
SIX5Q8N196 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC15.83■□□□□ 0.13
SIX5Q8N196 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC15.83■□□□□ 0.13
SIX5Q8N196 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC15.83■□□□□ 0.12
SIX5Q8N196 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SIX5Q8N196 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SIX5Q8N196 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SIX5Q8N196 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC15.83■□□□□ 0.12
SIX5Q8N196 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SIX5Q8N196 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SIX5Q8N196 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SIX5Q8N196 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC15.83■□□□□ 0.12
SIX5Q8N196 NDUFAB1P1-201ENST00000404262 460 ntBASIC15.83■□□□□ 0.12
SIX5Q8N196 TISP43-201ENST00000409793 538 ntTSL 4 BASIC15.83■□□□□ 0.12
SIX5Q8N196 AC079178.1-201ENST00000420915 656 ntBASIC15.83■□□□□ 0.12
SIX5Q8N196 ATP6V0CP2-201ENST00000469409 207 ntBASIC15.83■□□□□ 0.12
SIX5Q8N196 RN7SL11P-201ENST00000471305 293 ntBASIC15.83■□□□□ 0.12
SIX5Q8N196 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC15.83■□□□□ 0.12
SIX5Q8N196 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC15.83■□□□□ 0.12
SIX5Q8N196 AC134698.3-201ENST00000523880 214 ntBASIC15.83■□□□□ 0.12
SIX5Q8N196 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC15.83■□□□□ 0.12
SIX5Q8N196 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC15.83■□□□□ 0.12
SIX5Q8N196 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
SIX5Q8N196 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC15.83■□□□□ 0.12
SIX5Q8N196 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC15.83■□□□□ 0.12
SIX5Q8N196 AC092978.1-201ENST00000474979 1309 ntTSL 5 BASIC15.83■□□□□ 0.12
SIX5Q8N196 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
SIX5Q8N196 AC092978.1-202ENST00000637590 1327 ntBASIC15.83■□□□□ 0.12
SIX5Q8N196 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SIX5Q8N196 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
SIX5Q8N196 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
SIX5Q8N196 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SIX5Q8N196 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC15.83■□□□□ 0.12
SIX5Q8N196 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC15.83■□□□□ 0.12
SIX5Q8N196 LINC02228-204ENST00000642115 2962 ntBASIC15.83■□□□□ 0.12
SIX5Q8N196 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
SIX5Q8N196 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SIX5Q8N196 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC15.83■□□□□ 0.12
SIX5Q8N196 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
SIX5Q8N196 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SIX5Q8N196 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SIX5Q8N196 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC15.82■□□□□ 0.12
SIX5Q8N196 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC15.82■□□□□ 0.12
SIX5Q8N196 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
SIX5Q8N196 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC15.82■□□□□ 0.12
SIX5Q8N196 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SIX5Q8N196 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SIX5Q8N196 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SIX5Q8N196 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
SIX5Q8N196 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SIX5Q8N196 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SIX5Q8N196 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SIX5Q8N196 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SIX5Q8N196 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SIX5Q8N196 FAM3B-203ENST00000398647 864 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
SIX5Q8N196 FAM3B-204ENST00000398652 1125 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SIX5Q8N196 ACTBP8-201ENST00000403258 1108 ntBASIC15.82■□□□□ 0.12
SIX5Q8N196 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC15.82■□□□□ 0.12
SIX5Q8N196 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SIX5Q8N196 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC15.82■□□□□ 0.12
SIX5Q8N196 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SIX5Q8N196 GAPDHP40-201ENST00000505218 1006 ntBASIC15.82■□□□□ 0.12
SIX5Q8N196 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SIX5Q8N196 SDHD-202ENST00000525291 790 ntTSL 3 BASIC15.82■□□□□ 0.12
SIX5Q8N196 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC15.82■□□□□ 0.12
SIX5Q8N196 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SIX5Q8N196 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
SIX5Q8N196 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
SIX5Q8N196 RN7SL48P-201ENST00000579283 293 ntBASIC15.82■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms