Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
LRRTM1Q86UE6 SERF2-217ENST00000630046 862 ntTSL 5 BASIC13.45□□□□□ -0.26
LRRTM1Q86UE6 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC13.45□□□□□ -0.26
LRRTM1Q86UE6 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LRRTM1Q86UE6 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
LRRTM1Q86UE6 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
LRRTM1Q86UE6 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LRRTM1Q86UE6 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
LRRTM1Q86UE6 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC13.45□□□□□ -0.26
LRRTM1Q86UE6 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
LRRTM1Q86UE6 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC13.45□□□□□ -0.26
LRRTM1Q86UE6 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LRRTM1Q86UE6 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LRRTM1Q86UE6 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LRRTM1Q86UE6 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LRRTM1Q86UE6 MFF-204ENST00000353339 2186 ntTSL 5 BASIC13.45□□□□□ -0.26
LRRTM1Q86UE6 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
LRRTM1Q86UE6 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LRRTM1Q86UE6 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
LRRTM1Q86UE6 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
LRRTM1Q86UE6 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LRRTM1Q86UE6 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LRRTM1Q86UE6 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
LRRTM1Q86UE6 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LRRTM1Q86UE6 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC13.45□□□□□ -0.26
LRRTM1Q86UE6 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
LRRTM1Q86UE6 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
LRRTM1Q86UE6 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
LRRTM1Q86UE6 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
LRRTM1Q86UE6 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
LRRTM1Q86UE6 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LRRTM1Q86UE6 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
LRRTM1Q86UE6 AP001267.2-201ENST00000532619 2086 ntBASIC13.44□□□□□ -0.26
LRRTM1Q86UE6 KCP-203ENST00000610776 5108 ntTSL 5 BASIC13.44□□□□□ -0.26
LRRTM1Q86UE6 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
LRRTM1Q86UE6 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
LRRTM1Q86UE6 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
LRRTM1Q86UE6 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC13.44□□□□□ -0.26
LRRTM1Q86UE6 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
LRRTM1Q86UE6 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC13.44□□□□□ -0.26
LRRTM1Q86UE6 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC13.44□□□□□ -0.26
LRRTM1Q86UE6 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
LRRTM1Q86UE6 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC13.44□□□□□ -0.26
LRRTM1Q86UE6 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC13.44□□□□□ -0.26
LRRTM1Q86UE6 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
LRRTM1Q86UE6 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC13.44□□□□□ -0.26
LRRTM1Q86UE6 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
LRRTM1Q86UE6 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
LRRTM1Q86UE6 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
LRRTM1Q86UE6 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
LRRTM1Q86UE6 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
LRRTM1Q86UE6 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
LRRTM1Q86UE6 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
LRRTM1Q86UE6 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
LRRTM1Q86UE6 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC13.44□□□□□ -0.26
LRRTM1Q86UE6 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC13.44□□□□□ -0.26
LRRTM1Q86UE6 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
LRRTM1Q86UE6 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC13.44□□□□□ -0.26
LRRTM1Q86UE6 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
LRRTM1Q86UE6 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
LRRTM1Q86UE6 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
LRRTM1Q86UE6 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC13.44□□□□□ -0.26
LRRTM1Q86UE6 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC13.44□□□□□ -0.26
LRRTM1Q86UE6 AL662844.1-201ENST00000546340 181 ntBASIC13.44□□□□□ -0.26
LRRTM1Q86UE6 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
LRRTM1Q86UE6 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC13.44□□□□□ -0.26
LRRTM1Q86UE6 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
LRRTM1Q86UE6 AC092902.6-201ENST00000641783 218 ntBASIC13.44□□□□□ -0.26
LRRTM1Q86UE6 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
LRRTM1Q86UE6 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
LRRTM1Q86UE6 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
LRRTM1Q86UE6 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
LRRTM1Q86UE6 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC13.44□□□□□ -0.26
LRRTM1Q86UE6 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
LRRTM1Q86UE6 OS9-207ENST00000439210 1946 ntTSL 2 BASIC13.44□□□□□ -0.26
LRRTM1Q86UE6 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC13.44□□□□□ -0.26
LRRTM1Q86UE6 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
LRRTM1Q86UE6 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
LRRTM1Q86UE6 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
LRRTM1Q86UE6 AC018442.1-201ENST00000421439 2061 ntBASIC13.44□□□□□ -0.26
LRRTM1Q86UE6 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
LRRTM1Q86UE6 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
LRRTM1Q86UE6 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
LRRTM1Q86UE6 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
LRRTM1Q86UE6 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
LRRTM1Q86UE6 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
LRRTM1Q86UE6 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC13.44□□□□□ -0.26
LRRTM1Q86UE6 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
LRRTM1Q86UE6 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
LRRTM1Q86UE6 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
LRRTM1Q86UE6 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC13.43□□□□□ -0.26
LRRTM1Q86UE6 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
LRRTM1Q86UE6 AL137784.3-201ENST00000623858 2288 ntBASIC13.43□□□□□ -0.26
LRRTM1Q86UE6 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
LRRTM1Q86UE6 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
LRRTM1Q86UE6 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC13.43□□□□□ -0.26
LRRTM1Q86UE6 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
LRRTM1Q86UE6 GRN-214ENST00000589265 1632 ntTSL 5 BASIC13.43□□□□□ -0.26
LRRTM1Q86UE6 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC13.43□□□□□ -0.26
LRRTM1Q86UE6 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms