Protein–RNA interactions for Protein: Q7Z408

CSMD2, CUB and sushi domain-containing protein 2, humanhuman

Predictions only

Length 3,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2Q7Z408 NEU3-207ENST00000534628 746 ntTSL 2 BASIC12.65□□□□□ -0.38
CSMD2Q7Z408 RBFOX3-206ENST00000582043 1143 ntTSL 5 BASIC12.65□□□□□ -0.38
CSMD2Q7Z408 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC12.65□□□□□ -0.38
CSMD2Q7Z408 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC12.65□□□□□ -0.38
CSMD2Q7Z408 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CSMD2Q7Z408 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
CSMD2Q7Z408 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CSMD2Q7Z408 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
CSMD2Q7Z408 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
CSMD2Q7Z408 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
CSMD2Q7Z408 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
CSMD2Q7Z408 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CSMD2Q7Z408 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
CSMD2Q7Z408 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
CSMD2Q7Z408 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
CSMD2Q7Z408 TNNI2-201ENST00000252898 678 ntAPPRIS P3 TSL 3 BASIC12.65□□□□□ -0.38
CSMD2Q7Z408 CST1-201ENST00000304749 760 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CSMD2Q7Z408 TNNI2-202ENST00000381905 706 ntAPPRIS ALT1 TSL 3 BASIC12.65□□□□□ -0.38
CSMD2Q7Z408 TNNI2-203ENST00000381906 745 ntAPPRIS P3 TSL 3 BASIC12.65□□□□□ -0.38
CSMD2Q7Z408 TNNI2-204ENST00000381911 743 ntAPPRIS P3 TSL 2 BASIC12.65□□□□□ -0.38
CSMD2Q7Z408 LIF-202ENST00000403987 592 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CSMD2Q7Z408 LINC02228-201ENST00000507600 534 ntTSL 2 BASIC12.65□□□□□ -0.38
CSMD2Q7Z408 SHBG-210ENST00000572262 984 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CSMD2Q7Z408 AC138696.2-201ENST00000607376 223 ntBASIC12.65□□□□□ -0.38
CSMD2Q7Z408 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CSMD2Q7Z408 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC12.65□□□□□ -0.38
CSMD2Q7Z408 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CSMD2Q7Z408 EDNRB-204ENST00000626030 1571 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CSMD2Q7Z408 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC12.65□□□□□ -0.38
CSMD2Q7Z408 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CSMD2Q7Z408 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC12.65□□□□□ -0.38
CSMD2Q7Z408 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC12.65□□□□□ -0.38
CSMD2Q7Z408 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
CSMD2Q7Z408 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
CSMD2Q7Z408 SLC50A1-202ENST00000368401 1166 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CSMD2Q7Z408 NCR3-202ENST00000376071 541 ntTSL 5 BASIC12.65□□□□□ -0.38
CSMD2Q7Z408 HCG9-201ENST00000376800 663 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CSMD2Q7Z408 AC078875.1-201ENST00000431907 724 ntBASIC12.65□□□□□ -0.38
CSMD2Q7Z408 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC12.65□□□□□ -0.38
CSMD2Q7Z408 AC073592.2-201ENST00000623062 780 ntBASIC12.65□□□□□ -0.38
CSMD2Q7Z408 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC12.65□□□□□ -0.38
CSMD2Q7Z408 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC12.65□□□□□ -0.38
CSMD2Q7Z408 AC079325.2-201ENST00000641710 606 ntAPPRIS P5 BASIC12.65□□□□□ -0.38
CSMD2Q7Z408 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
CSMD2Q7Z408 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC12.65□□□□□ -0.38
CSMD2Q7Z408 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC12.65□□□□□ -0.38
CSMD2Q7Z408 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
CSMD2Q7Z408 FKBP4P6-201ENST00000457486 1332 ntBASIC12.65□□□□□ -0.38
CSMD2Q7Z408 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
CSMD2Q7Z408 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
CSMD2Q7Z408 LTF-202ENST00000417439 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.39
CSMD2Q7Z408 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
CSMD2Q7Z408 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC12.64□□□□□ -0.39
CSMD2Q7Z408 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
CSMD2Q7Z408 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CSMD2Q7Z408 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CSMD2Q7Z408 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CSMD2Q7Z408 AL137058.1-201ENST00000418237 673 ntTSL 5 BASIC12.64□□□□□ -0.39
CSMD2Q7Z408 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CSMD2Q7Z408 AC108471.2-201ENST00000533736 1061 ntTSL 3 BASIC12.64□□□□□ -0.39
CSMD2Q7Z408 AL355916.2-201ENST00000556543 593 ntTSL 4 BASIC12.64□□□□□ -0.39
CSMD2Q7Z408 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
CSMD2Q7Z408 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CSMD2Q7Z408 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CSMD2Q7Z408 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CSMD2Q7Z408 FRMD6-AS1-201ENST00000617151 2229 ntBASIC12.64□□□□□ -0.39
CSMD2Q7Z408 AC007292.2-201ENST00000593524 1812 ntBASIC12.64□□□□□ -0.39
CSMD2Q7Z408 TNRC18P3-201ENST00000441896 2691 ntBASIC12.64□□□□□ -0.39
CSMD2Q7Z408 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CSMD2Q7Z408 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CSMD2Q7Z408 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
CSMD2Q7Z408 BABAM2-204ENST00000379624 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CSMD2Q7Z408 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
CSMD2Q7Z408 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC12.64□□□□□ -0.39
CSMD2Q7Z408 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CSMD2Q7Z408 SNX15-201ENST00000352068 771 ntTSL 5 BASIC12.64□□□□□ -0.39
CSMD2Q7Z408 AL583805.1-201ENST00000391389 531 ntBASIC12.64□□□□□ -0.39
CSMD2Q7Z408 STK16-203ENST00000409516 895 ntTSL 2 BASIC12.64□□□□□ -0.39
CSMD2Q7Z408 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CSMD2Q7Z408 AC026320.2-201ENST00000434379 478 ntBASIC12.64□□□□□ -0.39
CSMD2Q7Z408 AC004540.1-204ENST00000449537 727 ntTSL 2 BASIC12.64□□□□□ -0.39
CSMD2Q7Z408 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC12.64□□□□□ -0.39
CSMD2Q7Z408 SNX11-210ENST00000582104 1282 ntTSL 2 BASIC12.64□□□□□ -0.39
CSMD2Q7Z408 ANAPC11-221ENST00000584314 559 ntTSL 2 BASIC12.64□□□□□ -0.39
CSMD2Q7Z408 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC12.64□□□□□ -0.39
CSMD2Q7Z408 AL139339.2-201ENST00000608063 657 ntBASIC12.64□□□□□ -0.39
CSMD2Q7Z408 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
CSMD2Q7Z408 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CSMD2Q7Z408 PSTPIP1-207ENST00000559295 1349 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CSMD2Q7Z408 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC12.64□□□□□ -0.39
CSMD2Q7Z408 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CSMD2Q7Z408 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
CSMD2Q7Z408 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CSMD2Q7Z408 RAN-210ENST00000541630 1475 ntTSL 2 BASIC12.64□□□□□ -0.39
CSMD2Q7Z408 AC092850.2-201ENST00000623821 2697 ntBASIC12.64□□□□□ -0.39
CSMD2Q7Z408 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
CSMD2Q7Z408 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CSMD2Q7Z408 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC12.64□□□□□ -0.39
CSMD2Q7Z408 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC12.64□□□□□ -0.39
CSMD2Q7Z408 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC12.64□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 55.8 ms