Protein–RNA interactions for Protein: Q7LBR1

CHMP1B, Charged multivesicular body protein 1b, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1BQ7LBR1 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CHMP1BQ7LBR1 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
CHMP1BQ7LBR1 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CHMP1BQ7LBR1 PPP1R26P4-201ENST00000619065 3527 ntBASIC14.37□□□□□ -0.11
CHMP1BQ7LBR1 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CHMP1BQ7LBR1 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC14.37□□□□□ -0.11
CHMP1BQ7LBR1 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CHMP1BQ7LBR1 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC14.37□□□□□ -0.11
CHMP1BQ7LBR1 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CHMP1BQ7LBR1 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC14.37□□□□□ -0.11
CHMP1BQ7LBR1 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
CHMP1BQ7LBR1 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
CHMP1BQ7LBR1 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CHMP1BQ7LBR1 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CHMP1BQ7LBR1 C8orf49-201ENST00000525043 1968 ntBASIC14.36□□□□□ -0.11
CHMP1BQ7LBR1 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC14.36□□□□□ -0.11
CHMP1BQ7LBR1 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CHMP1BQ7LBR1 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
CHMP1BQ7LBR1 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CHMP1BQ7LBR1 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CHMP1BQ7LBR1 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
CHMP1BQ7LBR1 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CHMP1BQ7LBR1 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
CHMP1BQ7LBR1 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC14.36□□□□□ -0.11
CHMP1BQ7LBR1 KRT8P37-201ENST00000451609 1420 ntBASIC14.36□□□□□ -0.11
CHMP1BQ7LBR1 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
CHMP1BQ7LBR1 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CHMP1BQ7LBR1 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CHMP1BQ7LBR1 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
CHMP1BQ7LBR1 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CHMP1BQ7LBR1 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC14.36□□□□□ -0.11
CHMP1BQ7LBR1 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CHMP1BQ7LBR1 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC14.36□□□□□ -0.11
CHMP1BQ7LBR1 LHX6-205ENST00000464484 666 ntTSL 2 BASIC14.36□□□□□ -0.11
CHMP1BQ7LBR1 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC14.36□□□□□ -0.11
CHMP1BQ7LBR1 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CHMP1BQ7LBR1 TIMM17BP1-201ENST00000545713 516 ntBASIC14.36□□□□□ -0.11
CHMP1BQ7LBR1 AC190387.1-201ENST00000551683 408 ntBASIC14.36□□□□□ -0.11
CHMP1BQ7LBR1 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC14.36□□□□□ -0.11
CHMP1BQ7LBR1 COX11-202ENST00000571584 1108 ntTSL 2 BASIC14.36□□□□□ -0.11
CHMP1BQ7LBR1 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CHMP1BQ7LBR1 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC14.36□□□□□ -0.11
CHMP1BQ7LBR1 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC14.36□□□□□ -0.11
CHMP1BQ7LBR1 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC14.36□□□□□ -0.11
CHMP1BQ7LBR1 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CHMP1BQ7LBR1 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CHMP1BQ7LBR1 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CHMP1BQ7LBR1 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
CHMP1BQ7LBR1 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
CHMP1BQ7LBR1 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC14.36□□□□□ -0.11
CHMP1BQ7LBR1 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC14.36□□□□□ -0.11
CHMP1BQ7LBR1 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC14.36□□□□□ -0.11
CHMP1BQ7LBR1 SAMD4A-202ENST00000392067 6833 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
CHMP1BQ7LBR1 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CHMP1BQ7LBR1 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC14.36□□□□□ -0.11
CHMP1BQ7LBR1 MIR193BHG-211ENST00000641433 5365 ntBASIC14.36□□□□□ -0.11
CHMP1BQ7LBR1 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC14.36□□□□□ -0.11
CHMP1BQ7LBR1 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
CHMP1BQ7LBR1 AL596087.1-201ENST00000400979 1969 ntBASIC14.36□□□□□ -0.11
CHMP1BQ7LBR1 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CHMP1BQ7LBR1 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CHMP1BQ7LBR1 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
CHMP1BQ7LBR1 PEG13-201ENST00000631594 5667 ntBASIC14.36□□□□□ -0.11
CHMP1BQ7LBR1 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CHMP1BQ7LBR1 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CHMP1BQ7LBR1 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CHMP1BQ7LBR1 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
CHMP1BQ7LBR1 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CHMP1BQ7LBR1 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
CHMP1BQ7LBR1 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC14.36□□□□□ -0.11
CHMP1BQ7LBR1 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CHMP1BQ7LBR1 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CHMP1BQ7LBR1 AC139749.1-202ENST00000617529 3139 ntBASIC14.35□□□□□ -0.11
CHMP1BQ7LBR1 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CHMP1BQ7LBR1 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
CHMP1BQ7LBR1 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC14.35□□□□□ -0.11
CHMP1BQ7LBR1 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CHMP1BQ7LBR1 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CHMP1BQ7LBR1 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
CHMP1BQ7LBR1 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC14.35□□□□□ -0.11
CHMP1BQ7LBR1 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CHMP1BQ7LBR1 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CHMP1BQ7LBR1 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
CHMP1BQ7LBR1 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CHMP1BQ7LBR1 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC14.35□□□□□ -0.11
CHMP1BQ7LBR1 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC14.35□□□□□ -0.11
CHMP1BQ7LBR1 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC14.35□□□□□ -0.11
CHMP1BQ7LBR1 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC14.35□□□□□ -0.11
CHMP1BQ7LBR1 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CHMP1BQ7LBR1 SUOX-214ENST00000551841 906 ntTSL 3 BASIC14.35□□□□□ -0.11
CHMP1BQ7LBR1 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC14.35□□□□□ -0.11
CHMP1BQ7LBR1 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC14.35□□□□□ -0.11
CHMP1BQ7LBR1 AL844908.2-201ENST00000609461 460 ntBASIC14.35□□□□□ -0.11
CHMP1BQ7LBR1 SP100-205ENST00000409824 1802 ntTSL 5 BASIC14.35□□□□□ -0.11
CHMP1BQ7LBR1 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC14.35□□□□□ -0.11
CHMP1BQ7LBR1 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC14.35□□□□□ -0.11
CHMP1BQ7LBR1 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CHMP1BQ7LBR1 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
CHMP1BQ7LBR1 CDK12-201ENST00000430627 5918 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CHMP1BQ7LBR1 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 59.8 ms