Protein–RNA interactions for Protein: Q70EL3

USP50, Inactive ubiquitin carboxyl-terminal hydrolase 50, humanhuman

Predicted RBP Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP50Q70EL3 HIST1H2BE-201ENST00000614097 497 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
USP50Q70EL3 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC17.83■□□□□ 0.44
USP50Q70EL3 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
USP50Q70EL3 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
USP50Q70EL3 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
USP50Q70EL3 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
USP50Q70EL3 ABR-203ENST00000536794 2213 ntTSL 2 BASIC17.83■□□□□ 0.44
USP50Q70EL3 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
USP50Q70EL3 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
USP50Q70EL3 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
USP50Q70EL3 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
USP50Q70EL3 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC17.82■□□□□ 0.44
USP50Q70EL3 ILF3-AS1-201ENST00000591501 1983 ntBASIC17.82■□□□□ 0.44
USP50Q70EL3 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
USP50Q70EL3 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
USP50Q70EL3 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
USP50Q70EL3 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
USP50Q70EL3 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
USP50Q70EL3 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
USP50Q70EL3 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC17.82■□□□□ 0.44
USP50Q70EL3 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
USP50Q70EL3 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC17.82■□□□□ 0.44
USP50Q70EL3 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
USP50Q70EL3 RAB25-201ENST00000361084 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
USP50Q70EL3 IFI35-203ENST00000415816 1241 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
USP50Q70EL3 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
USP50Q70EL3 DCST1-AS1-201ENST00000452962 822 ntTSL 2 BASIC17.82■□□□□ 0.44
USP50Q70EL3 AL512330.1-201ENST00000456701 349 ntTSL 3 BASIC17.82■□□□□ 0.44
USP50Q70EL3 TP53AIP1-201ENST00000458238 777 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
USP50Q70EL3 EMP2-203ENST00000536829 781 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
USP50Q70EL3 SMIM6-201ENST00000556126 866 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
USP50Q70EL3 DCTPP1-202ENST00000565758 749 ntTSL 3 BASIC17.82■□□□□ 0.44
USP50Q70EL3 AC024361.2-201ENST00000574471 898 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
USP50Q70EL3 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
USP50Q70EL3 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC17.82■□□□□ 0.44
USP50Q70EL3 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
USP50Q70EL3 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
USP50Q70EL3 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
USP50Q70EL3 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
USP50Q70EL3 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
USP50Q70EL3 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
USP50Q70EL3 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
USP50Q70EL3 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
USP50Q70EL3 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
USP50Q70EL3 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
USP50Q70EL3 AC127383.1-201ENST00000444697 1800 ntBASIC17.82■□□□□ 0.44
USP50Q70EL3 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
USP50Q70EL3 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
USP50Q70EL3 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC17.81■□□□□ 0.44
USP50Q70EL3 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
USP50Q70EL3 TMEM177-202ENST00000401466 1346 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
USP50Q70EL3 KRT18P9-201ENST00000604826 1300 ntBASIC17.81■□□□□ 0.44
USP50Q70EL3 CEP128-201ENST00000216517 1606 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
USP50Q70EL3 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC17.81■□□□□ 0.44
USP50Q70EL3 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC17.81■□□□□ 0.44
USP50Q70EL3 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
USP50Q70EL3 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC17.81■□□□□ 0.44
USP50Q70EL3 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
USP50Q70EL3 LINC01433-201ENST00000419003 697 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
USP50Q70EL3 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC17.81■□□□□ 0.44
USP50Q70EL3 NCK1-AS1-203ENST00000474250 827 ntTSL 2 BASIC17.81■□□□□ 0.44
USP50Q70EL3 ALG1L13P-202ENST00000519320 584 ntBASIC17.81■□□□□ 0.44
USP50Q70EL3 CLNS1A-211ENST00000532069 898 ntTSL 3 BASIC17.81■□□□□ 0.44
USP50Q70EL3 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC17.81■□□□□ 0.44
USP50Q70EL3 RN7SL596P-201ENST00000582123 288 ntBASIC17.81■□□□□ 0.44
USP50Q70EL3 MIR4522-201ENST00000584932 87 ntBASIC17.81■□□□□ 0.44
USP50Q70EL3 MYOZ3-209ENST00000615557 1031 ntTSL 2 BASIC17.81■□□□□ 0.44
USP50Q70EL3 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
USP50Q70EL3 KRTAP10-4-203ENST00000622352 1244 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
USP50Q70EL3 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
USP50Q70EL3 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
USP50Q70EL3 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC17.81■□□□□ 0.44
USP50Q70EL3 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
USP50Q70EL3 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
USP50Q70EL3 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
USP50Q70EL3 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC17.81■□□□□ 0.44
USP50Q70EL3 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
USP50Q70EL3 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
USP50Q70EL3 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
USP50Q70EL3 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
USP50Q70EL3 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
USP50Q70EL3 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
USP50Q70EL3 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
USP50Q70EL3 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
USP50Q70EL3 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC17.8■□□□□ 0.44
USP50Q70EL3 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
USP50Q70EL3 PCNA-202ENST00000379160 1359 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
USP50Q70EL3 FLJ38576-201ENST00000623820 2459 ntBASIC17.8■□□□□ 0.44
USP50Q70EL3 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
USP50Q70EL3 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
USP50Q70EL3 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
USP50Q70EL3 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
USP50Q70EL3 RBM4B-206ENST00000531036 1646 ntTSL 2 BASIC17.8■□□□□ 0.44
USP50Q70EL3 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
USP50Q70EL3 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
USP50Q70EL3 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
USP50Q70EL3 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC17.8■□□□□ 0.44
USP50Q70EL3 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
USP50Q70EL3 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
USP50Q70EL3 BAK1P1-201ENST00000317045 636 ntBASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 63.2 ms