Protein–RNA interactions for Protein: Q6S5L8

SHC4, SHC-transforming protein 4, humanhuman

Predictions only

Length 630 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC4Q6S5L8 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC17.39■□□□□ 0.37
SHC4Q6S5L8 METTL21AP1-201ENST00000438852 635 ntBASIC17.39■□□□□ 0.37
SHC4Q6S5L8 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC17.39■□□□□ 0.37
SHC4Q6S5L8 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
SHC4Q6S5L8 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC17.39■□□□□ 0.37
SHC4Q6S5L8 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
SHC4Q6S5L8 TIMM17BP1-201ENST00000545713 516 ntBASIC17.39■□□□□ 0.37
SHC4Q6S5L8 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC17.39■□□□□ 0.37
SHC4Q6S5L8 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC17.39■□□□□ 0.37
SHC4Q6S5L8 ARL16-202ENST00000570561 768 ntTSL 2 BASIC17.39■□□□□ 0.37
SHC4Q6S5L8 SAMD11P1-201ENST00000571429 661 ntBASIC17.39■□□□□ 0.37
SHC4Q6S5L8 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC17.39■□□□□ 0.37
SHC4Q6S5L8 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC17.39■□□□□ 0.37
SHC4Q6S5L8 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC17.39■□□□□ 0.37
SHC4Q6S5L8 AC139530.3-201ENST00000620344 690 ntBASIC17.39■□□□□ 0.37
SHC4Q6S5L8 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
SHC4Q6S5L8 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC17.39■□□□□ 0.37
SHC4Q6S5L8 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SHC4Q6S5L8 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC17.39■□□□□ 0.37
SHC4Q6S5L8 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC17.39■□□□□ 0.37
SHC4Q6S5L8 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC17.39■□□□□ 0.37
SHC4Q6S5L8 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SHC4Q6S5L8 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC17.39■□□□□ 0.37
SHC4Q6S5L8 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC17.39■□□□□ 0.37
SHC4Q6S5L8 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SHC4Q6S5L8 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC17.39■□□□□ 0.37
SHC4Q6S5L8 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC17.39■□□□□ 0.37
SHC4Q6S5L8 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SHC4Q6S5L8 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SHC4Q6S5L8 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
SHC4Q6S5L8 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC17.38■□□□□ 0.37
SHC4Q6S5L8 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
SHC4Q6S5L8 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC17.38■□□□□ 0.37
SHC4Q6S5L8 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC17.38■□□□□ 0.37
SHC4Q6S5L8 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC17.38■□□□□ 0.37
SHC4Q6S5L8 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SHC4Q6S5L8 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC17.38■□□□□ 0.37
SHC4Q6S5L8 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SHC4Q6S5L8 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SHC4Q6S5L8 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SHC4Q6S5L8 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
SHC4Q6S5L8 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SHC4Q6S5L8 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SHC4Q6S5L8 PKIG-203ENST00000372887 769 ntTSL 3 BASIC17.38■□□□□ 0.37
SHC4Q6S5L8 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC17.38■□□□□ 0.37
SHC4Q6S5L8 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC17.38■□□□□ 0.37
SHC4Q6S5L8 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC17.38■□□□□ 0.37
SHC4Q6S5L8 AC004890.2-204ENST00000481968 304 ntBASIC17.38■□□□□ 0.37
SHC4Q6S5L8 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
SHC4Q6S5L8 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC17.38■□□□□ 0.37
SHC4Q6S5L8 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
SHC4Q6S5L8 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
SHC4Q6S5L8 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
SHC4Q6S5L8 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SHC4Q6S5L8 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SHC4Q6S5L8 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SHC4Q6S5L8 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SHC4Q6S5L8 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC17.38■□□□□ 0.37
SHC4Q6S5L8 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC17.38■□□□□ 0.37
SHC4Q6S5L8 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
SHC4Q6S5L8 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SHC4Q6S5L8 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
SHC4Q6S5L8 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC17.38■□□□□ 0.37
SHC4Q6S5L8 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SHC4Q6S5L8 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
SHC4Q6S5L8 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SHC4Q6S5L8 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC17.37■□□□□ 0.37
SHC4Q6S5L8 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SHC4Q6S5L8 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SHC4Q6S5L8 BTBD7P1-201ENST00000447253 1453 ntBASIC17.37■□□□□ 0.37
SHC4Q6S5L8 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
SHC4Q6S5L8 AC139749.1-202ENST00000617529 3139 ntBASIC17.37■□□□□ 0.37
SHC4Q6S5L8 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
SHC4Q6S5L8 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
SHC4Q6S5L8 AL157414.3-201ENST00000624276 1954 ntBASIC17.37■□□□□ 0.37
SHC4Q6S5L8 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC17.37■□□□□ 0.37
SHC4Q6S5L8 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC17.37■□□□□ 0.37
SHC4Q6S5L8 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC17.37■□□□□ 0.37
SHC4Q6S5L8 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
SHC4Q6S5L8 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
SHC4Q6S5L8 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SHC4Q6S5L8 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SHC4Q6S5L8 MEIS3P1-201ENST00000495167 958 ntBASIC17.37■□□□□ 0.37
SHC4Q6S5L8 IGHV3-42-201ENST00000520410 361 ntBASIC17.37■□□□□ 0.37
SHC4Q6S5L8 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SHC4Q6S5L8 FTH1-202ENST00000526640 786 ntTSL 2 BASIC17.37■□□□□ 0.37
SHC4Q6S5L8 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
SHC4Q6S5L8 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC17.37■□□□□ 0.37
SHC4Q6S5L8 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
SHC4Q6S5L8 SRD5A3P1-201ENST00000603021 949 ntBASIC17.37■□□□□ 0.37
SHC4Q6S5L8 AL390955.2-201ENST00000603032 514 ntBASIC17.37■□□□□ 0.37
SHC4Q6S5L8 AL390754.1-201ENST00000619088 582 ntBASIC17.37■□□□□ 0.37
SHC4Q6S5L8 FER1L4-210ENST00000615531 5998 ntBASIC17.37■□□□□ 0.37
SHC4Q6S5L8 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SHC4Q6S5L8 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SHC4Q6S5L8 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SHC4Q6S5L8 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SHC4Q6S5L8 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
SHC4Q6S5L8 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SHC4Q6S5L8 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms