Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
RFWD3Q6PCD5 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC16.13■□□□□ 0.17
RFWD3Q6PCD5 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
RFWD3Q6PCD5 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RFWD3Q6PCD5 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC16.13■□□□□ 0.17
RFWD3Q6PCD5 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RFWD3Q6PCD5 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
RFWD3Q6PCD5 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RFWD3Q6PCD5 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
RFWD3Q6PCD5 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RFWD3Q6PCD5 SSR4P1-203ENST00000599569 2260 ntBASIC16.12■□□□□ 0.17
RFWD3Q6PCD5 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC16.12■□□□□ 0.17
RFWD3Q6PCD5 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RFWD3Q6PCD5 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
RFWD3Q6PCD5 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC16.12■□□□□ 0.17
RFWD3Q6PCD5 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RFWD3Q6PCD5 AC136621.1-201ENST00000624017 2304 ntBASIC16.12■□□□□ 0.17
RFWD3Q6PCD5 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
RFWD3Q6PCD5 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
RFWD3Q6PCD5 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
RFWD3Q6PCD5 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RFWD3Q6PCD5 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC16.12■□□□□ 0.17
RFWD3Q6PCD5 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RFWD3Q6PCD5 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RFWD3Q6PCD5 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RFWD3Q6PCD5 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RFWD3Q6PCD5 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC16.12■□□□□ 0.17
RFWD3Q6PCD5 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
RFWD3Q6PCD5 AL512384.1-201ENST00000406683 331 ntBASIC16.12■□□□□ 0.17
RFWD3Q6PCD5 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
RFWD3Q6PCD5 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
RFWD3Q6PCD5 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC16.12■□□□□ 0.17
RFWD3Q6PCD5 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC16.12■□□□□ 0.17
RFWD3Q6PCD5 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC16.12■□□□□ 0.17
RFWD3Q6PCD5 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC16.12■□□□□ 0.17
RFWD3Q6PCD5 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RFWD3Q6PCD5 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC16.12■□□□□ 0.17
RFWD3Q6PCD5 VDAC1P7-201ENST00000462417 847 ntBASIC16.12■□□□□ 0.17
RFWD3Q6PCD5 AC011495.1-201ENST00000498085 584 ntBASIC16.12■□□□□ 0.17
RFWD3Q6PCD5 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC16.12■□□□□ 0.17
RFWD3Q6PCD5 AL359711.2-201ENST00000563105 872 ntBASIC16.12■□□□□ 0.17
RFWD3Q6PCD5 PAM16-204ENST00000571941 674 ntTSL 3 BASIC16.12■□□□□ 0.17
RFWD3Q6PCD5 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC16.12■□□□□ 0.17
RFWD3Q6PCD5 AC000095.1-201ENST00000603208 874 ntBASIC16.12■□□□□ 0.17
RFWD3Q6PCD5 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC16.12■□□□□ 0.17
RFWD3Q6PCD5 AL033527.5-201ENST00000641382 801 ntBASIC16.12■□□□□ 0.17
RFWD3Q6PCD5 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RFWD3Q6PCD5 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
RFWD3Q6PCD5 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
RFWD3Q6PCD5 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RFWD3Q6PCD5 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RFWD3Q6PCD5 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RFWD3Q6PCD5 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
RFWD3Q6PCD5 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC16.12■□□□□ 0.17
RFWD3Q6PCD5 AC127383.1-201ENST00000444697 1800 ntBASIC16.12■□□□□ 0.17
RFWD3Q6PCD5 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
RFWD3Q6PCD5 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RFWD3Q6PCD5 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
RFWD3Q6PCD5 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
RFWD3Q6PCD5 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
RFWD3Q6PCD5 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
RFWD3Q6PCD5 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC16.12■□□□□ 0.17
RFWD3Q6PCD5 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC16.11■□□□□ 0.17
RFWD3Q6PCD5 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC16.11■□□□□ 0.17
RFWD3Q6PCD5 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RFWD3Q6PCD5 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC16.11■□□□□ 0.17
RFWD3Q6PCD5 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
RFWD3Q6PCD5 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC16.11■□□□□ 0.17
RFWD3Q6PCD5 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
RFWD3Q6PCD5 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC16.11■□□□□ 0.17
RFWD3Q6PCD5 AL359258.3-201ENST00000622910 2331 ntBASIC16.11■□□□□ 0.17
RFWD3Q6PCD5 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
RFWD3Q6PCD5 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RFWD3Q6PCD5 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC16.11■□□□□ 0.17
RFWD3Q6PCD5 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RFWD3Q6PCD5 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC16.11■□□□□ 0.17
RFWD3Q6PCD5 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RFWD3Q6PCD5 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
RFWD3Q6PCD5 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
RFWD3Q6PCD5 AL133267.1-201ENST00000398220 340 ntBASIC16.11■□□□□ 0.17
RFWD3Q6PCD5 PGF-202ENST00000405431 666 ntTSL 5 BASIC16.11■□□□□ 0.17
RFWD3Q6PCD5 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RFWD3Q6PCD5 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC16.11■□□□□ 0.17
RFWD3Q6PCD5 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC16.11■□□□□ 0.17
RFWD3Q6PCD5 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC16.11■□□□□ 0.17
RFWD3Q6PCD5 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC16.11■□□□□ 0.17
RFWD3Q6PCD5 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RFWD3Q6PCD5 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC16.11■□□□□ 0.17
RFWD3Q6PCD5 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
RFWD3Q6PCD5 AC015910.1-201ENST00000579400 975 ntBASIC16.11■□□□□ 0.17
RFWD3Q6PCD5 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
RFWD3Q6PCD5 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
RFWD3Q6PCD5 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
RFWD3Q6PCD5 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
RFWD3Q6PCD5 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
RFWD3Q6PCD5 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RFWD3Q6PCD5 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC16.11■□□□□ 0.17
RFWD3Q6PCD5 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC16.11■□□□□ 0.17
RFWD3Q6PCD5 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
RFWD3Q6PCD5 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms