Protein–RNA interactions for Protein: Q6ICC9

RTL6, Retrotransposon Gag-like protein 6, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL6Q6ICC9 BNIP3P42-201ENST00000454982 569 ntBASIC13.98□□□□□ -0.17
RTL6Q6ICC9 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RTL6Q6ICC9 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
RTL6Q6ICC9 BCRP6-201ENST00000510112 632 ntBASIC13.98□□□□□ -0.17
RTL6Q6ICC9 BCRP7-201ENST00000511549 544 ntBASIC13.98□□□□□ -0.17
RTL6Q6ICC9 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RTL6Q6ICC9 AP001889.1-201ENST00000525414 633 ntBASIC13.98□□□□□ -0.17
RTL6Q6ICC9 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC13.98□□□□□ -0.17
RTL6Q6ICC9 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC13.98□□□□□ -0.17
RTL6Q6ICC9 CMC2-214ENST00000565925 640 ntTSL 5 BASIC13.98□□□□□ -0.17
RTL6Q6ICC9 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC13.98□□□□□ -0.17
RTL6Q6ICC9 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC13.98□□□□□ -0.17
RTL6Q6ICC9 BNIP3P29-201ENST00000598302 571 ntBASIC13.98□□□□□ -0.17
RTL6Q6ICC9 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC13.98□□□□□ -0.17
RTL6Q6ICC9 AL022328.1-201ENST00000610050 478 ntBASIC13.98□□□□□ -0.17
RTL6Q6ICC9 RPS24-214ENST00000613865 538 ntTSL 5 BASIC13.98□□□□□ -0.17
RTL6Q6ICC9 AC011447.5-201ENST00000616168 564 ntBASIC13.98□□□□□ -0.17
RTL6Q6ICC9 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC13.98□□□□□ -0.17
RTL6Q6ICC9 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
RTL6Q6ICC9 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.17
RTL6Q6ICC9 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC13.98□□□□□ -0.17
RTL6Q6ICC9 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC13.98□□□□□ -0.17
RTL6Q6ICC9 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC13.98□□□□□ -0.17
RTL6Q6ICC9 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RTL6Q6ICC9 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
RTL6Q6ICC9 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC13.98□□□□□ -0.17
RTL6Q6ICC9 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RTL6Q6ICC9 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC13.98□□□□□ -0.17
RTL6Q6ICC9 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RTL6Q6ICC9 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC13.98□□□□□ -0.17
RTL6Q6ICC9 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RTL6Q6ICC9 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC13.97□□□□□ -0.17
RTL6Q6ICC9 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
RTL6Q6ICC9 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RTL6Q6ICC9 AC093525.8-201ENST00000624099 1342 ntBASIC13.97□□□□□ -0.17
RTL6Q6ICC9 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC13.97□□□□□ -0.17
RTL6Q6ICC9 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
RTL6Q6ICC9 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
RTL6Q6ICC9 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC13.97□□□□□ -0.17
RTL6Q6ICC9 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RTL6Q6ICC9 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RTL6Q6ICC9 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
RTL6Q6ICC9 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RTL6Q6ICC9 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC13.97□□□□□ -0.17
RTL6Q6ICC9 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
RTL6Q6ICC9 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
RTL6Q6ICC9 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
RTL6Q6ICC9 CTBP2P5-201ENST00000454986 1264 ntBASIC13.97□□□□□ -0.17
RTL6Q6ICC9 KRT18P43-201ENST00000469825 1281 ntBASIC13.97□□□□□ -0.17
RTL6Q6ICC9 AC068587.3-201ENST00000526613 355 ntBASIC13.97□□□□□ -0.17
RTL6Q6ICC9 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC13.97□□□□□ -0.17
RTL6Q6ICC9 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC13.97□□□□□ -0.17
RTL6Q6ICC9 PTP4A1P2-201ENST00000546033 454 ntBASIC13.97□□□□□ -0.17
RTL6Q6ICC9 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
RTL6Q6ICC9 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC13.97□□□□□ -0.17
RTL6Q6ICC9 AC011477.6-201ENST00000604980 1927 ntBASIC13.97□□□□□ -0.17
RTL6Q6ICC9 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RTL6Q6ICC9 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RTL6Q6ICC9 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC13.97□□□□□ -0.17
RTL6Q6ICC9 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RTL6Q6ICC9 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
RTL6Q6ICC9 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC13.97□□□□□ -0.17
RTL6Q6ICC9 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RTL6Q6ICC9 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC13.97□□□□□ -0.17
RTL6Q6ICC9 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
RTL6Q6ICC9 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RTL6Q6ICC9 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
RTL6Q6ICC9 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RTL6Q6ICC9 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RTL6Q6ICC9 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
RTL6Q6ICC9 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RTL6Q6ICC9 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RTL6Q6ICC9 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
RTL6Q6ICC9 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
RTL6Q6ICC9 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
RTL6Q6ICC9 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
RTL6Q6ICC9 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC13.96□□□□□ -0.17
RTL6Q6ICC9 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC13.96□□□□□ -0.17
RTL6Q6ICC9 USE1-206ENST00000595101 1776 ntTSL 2 BASIC13.96□□□□□ -0.17
RTL6Q6ICC9 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
RTL6Q6ICC9 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC13.96□□□□□ -0.17
RTL6Q6ICC9 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
RTL6Q6ICC9 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
RTL6Q6ICC9 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC13.96□□□□□ -0.17
RTL6Q6ICC9 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC13.96□□□□□ -0.17
RTL6Q6ICC9 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
RTL6Q6ICC9 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
RTL6Q6ICC9 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
RTL6Q6ICC9 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC13.96□□□□□ -0.17
RTL6Q6ICC9 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
RTL6Q6ICC9 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
RTL6Q6ICC9 TP73-209ENST00000603362 1668 ntTSL 5 BASIC13.96□□□□□ -0.17
RTL6Q6ICC9 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
RTL6Q6ICC9 CYP2AB1P-202ENST00000454440 1456 ntBASIC13.96□□□□□ -0.17
RTL6Q6ICC9 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC13.96□□□□□ -0.17
RTL6Q6ICC9 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
RTL6Q6ICC9 AC005229.1-201ENST00000392885 409 ntBASIC13.96□□□□□ -0.17
RTL6Q6ICC9 MPV17-208ENST00000405076 603 ntTSL 5 BASIC13.96□□□□□ -0.17
RTL6Q6ICC9 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC13.96□□□□□ -0.17
RTL6Q6ICC9 RPL28-203ENST00000428193 573 ntTSL 2 BASIC13.96□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms