Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
LYSMD4Q5XG99 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
LYSMD4Q5XG99 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC14.99□□□□□ -0.01
LYSMD4Q5XG99 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC14.99□□□□□ -0.01
LYSMD4Q5XG99 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
LYSMD4Q5XG99 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC14.99□□□□□ -0.01
LYSMD4Q5XG99 AL133499.1-201ENST00000596207 608 ntBASIC14.99□□□□□ -0.01
LYSMD4Q5XG99 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
LYSMD4Q5XG99 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
LYSMD4Q5XG99 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
LYSMD4Q5XG99 AC004899.1-201ENST00000424687 1714 ntBASIC14.99□□□□□ -0.01
LYSMD4Q5XG99 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
LYSMD4Q5XG99 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
LYSMD4Q5XG99 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
LYSMD4Q5XG99 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
LYSMD4Q5XG99 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
LYSMD4Q5XG99 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
LYSMD4Q5XG99 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
LYSMD4Q5XG99 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC14.99□□□□□ -0.01
LYSMD4Q5XG99 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
LYSMD4Q5XG99 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC14.99□□□□□ -0.01
LYSMD4Q5XG99 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
LYSMD4Q5XG99 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
LYSMD4Q5XG99 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
LYSMD4Q5XG99 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
LYSMD4Q5XG99 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
LYSMD4Q5XG99 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LYSMD4Q5XG99 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC14.98□□□□□ -0.01
LYSMD4Q5XG99 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LYSMD4Q5XG99 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
LYSMD4Q5XG99 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC14.98□□□□□ -0.01
LYSMD4Q5XG99 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
LYSMD4Q5XG99 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC14.98□□□□□ -0.01
LYSMD4Q5XG99 FKBP4P6-201ENST00000457486 1332 ntBASIC14.98□□□□□ -0.01
LYSMD4Q5XG99 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LYSMD4Q5XG99 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LYSMD4Q5XG99 LINC02447-202ENST00000501888 2146 ntBASIC14.98□□□□□ -0.01
LYSMD4Q5XG99 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LYSMD4Q5XG99 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LYSMD4Q5XG99 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LYSMD4Q5XG99 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LYSMD4Q5XG99 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LYSMD4Q5XG99 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
LYSMD4Q5XG99 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LYSMD4Q5XG99 KAZN-204ENST00000400797 1295 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
LYSMD4Q5XG99 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC14.98□□□□□ -0.01
LYSMD4Q5XG99 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC14.98□□□□□ -0.01
LYSMD4Q5XG99 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC14.98□□□□□ -0.01
LYSMD4Q5XG99 AC104073.2-201ENST00000453737 312 ntBASIC14.98□□□□□ -0.01
LYSMD4Q5XG99 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC14.98□□□□□ -0.01
LYSMD4Q5XG99 AC091390.4-201ENST00000484974 491 ntTSL 3 BASIC14.98□□□□□ -0.01
LYSMD4Q5XG99 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC14.98□□□□□ -0.01
LYSMD4Q5XG99 CSH2-206ENST00000560142 749 ntTSL 5 BASIC14.98□□□□□ -0.01
LYSMD4Q5XG99 AC100827.2-201ENST00000563214 1194 ntBASIC14.98□□□□□ -0.01
LYSMD4Q5XG99 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
LYSMD4Q5XG99 CENPX-208ENST00000584347 799 ntTSL 2 BASIC14.98□□□□□ -0.01
LYSMD4Q5XG99 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC14.98□□□□□ -0.01
LYSMD4Q5XG99 AL136301.1-201ENST00000615830 422 ntBASIC14.98□□□□□ -0.01
LYSMD4Q5XG99 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LYSMD4Q5XG99 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LYSMD4Q5XG99 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
LYSMD4Q5XG99 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
LYSMD4Q5XG99 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LYSMD4Q5XG99 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LYSMD4Q5XG99 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
LYSMD4Q5XG99 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LYSMD4Q5XG99 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC14.98□□□□□ -0.01
LYSMD4Q5XG99 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC14.98□□□□□ -0.01
LYSMD4Q5XG99 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
LYSMD4Q5XG99 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LYSMD4Q5XG99 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
LYSMD4Q5XG99 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LYSMD4Q5XG99 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LYSMD4Q5XG99 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC14.97□□□□□ -0.01
LYSMD4Q5XG99 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC14.97□□□□□ -0.01
LYSMD4Q5XG99 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
LYSMD4Q5XG99 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC14.97□□□□□ -0.01
LYSMD4Q5XG99 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
LYSMD4Q5XG99 AC006480.2-201ENST00000609770 1337 ntBASIC14.97□□□□□ -0.01
LYSMD4Q5XG99 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
LYSMD4Q5XG99 AL157791.1-201ENST00000553667 1699 ntBASIC14.97□□□□□ -0.01
LYSMD4Q5XG99 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC14.97□□□□□ -0.01
LYSMD4Q5XG99 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LYSMD4Q5XG99 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LYSMD4Q5XG99 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
LYSMD4Q5XG99 AC127383.1-201ENST00000444697 1800 ntBASIC14.97□□□□□ -0.01
LYSMD4Q5XG99 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LYSMD4Q5XG99 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
LYSMD4Q5XG99 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LYSMD4Q5XG99 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LYSMD4Q5XG99 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LYSMD4Q5XG99 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC14.97□□□□□ -0.01
LYSMD4Q5XG99 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC14.97□□□□□ -0.01
LYSMD4Q5XG99 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LYSMD4Q5XG99 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC14.97□□□□□ -0.01
LYSMD4Q5XG99 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
LYSMD4Q5XG99 GDAP1-202ENST00000434412 1228 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
LYSMD4Q5XG99 LINC01806-201ENST00000436506 765 ntTSL 2 BASIC14.97□□□□□ -0.01
LYSMD4Q5XG99 AC006335.1-201ENST00000445200 547 ntBASIC14.97□□□□□ -0.01
LYSMD4Q5XG99 AC234782.1-201ENST00000451950 919 ntBASIC14.97□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms