Protein–RNA interactions for Protein: Q494W8

CHRFAM7A, CHRNA7-FAM7A fusion protein, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7AQ494W8 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CHRFAM7AQ494W8 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
CHRFAM7AQ494W8 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CHRFAM7AQ494W8 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
CHRFAM7AQ494W8 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
CHRFAM7AQ494W8 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
CHRFAM7AQ494W8 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CHRFAM7AQ494W8 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC13.62□□□□□ -0.23
CHRFAM7AQ494W8 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC13.62□□□□□ -0.23
CHRFAM7AQ494W8 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
CHRFAM7AQ494W8 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CHRFAM7AQ494W8 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CHRFAM7AQ494W8 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CHRFAM7AQ494W8 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
CHRFAM7AQ494W8 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
CHRFAM7AQ494W8 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC13.62□□□□□ -0.23
CHRFAM7AQ494W8 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC13.62□□□□□ -0.23
CHRFAM7AQ494W8 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CHRFAM7AQ494W8 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CHRFAM7AQ494W8 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CHRFAM7AQ494W8 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
CHRFAM7AQ494W8 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
CHRFAM7AQ494W8 RNU1-129P-201ENST00000384064 167 ntBASIC13.62□□□□□ -0.23
CHRFAM7AQ494W8 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC13.62□□□□□ -0.23
CHRFAM7AQ494W8 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC13.62□□□□□ -0.23
CHRFAM7AQ494W8 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC13.62□□□□□ -0.23
CHRFAM7AQ494W8 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC13.62□□□□□ -0.23
CHRFAM7AQ494W8 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC13.62□□□□□ -0.23
CHRFAM7AQ494W8 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CHRFAM7AQ494W8 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC13.62□□□□□ -0.23
CHRFAM7AQ494W8 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC13.62□□□□□ -0.23
CHRFAM7AQ494W8 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
CHRFAM7AQ494W8 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CHRFAM7AQ494W8 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC13.62□□□□□ -0.23
CHRFAM7AQ494W8 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
CHRFAM7AQ494W8 MIR3909-201ENST00000579518 119 ntBASIC13.62□□□□□ -0.23
CHRFAM7AQ494W8 U1.21-201ENST00000580816 167 ntBASIC13.62□□□□□ -0.23
CHRFAM7AQ494W8 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CHRFAM7AQ494W8 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC13.62□□□□□ -0.23
CHRFAM7AQ494W8 NKG7-205ENST00000600427 520 ntTSL 3 BASIC13.62□□□□□ -0.23
CHRFAM7AQ494W8 GPER1-207ENST00000619052 571 ntTSL 2 BASIC13.62□□□□□ -0.23
CHRFAM7AQ494W8 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC13.62□□□□□ -0.23
CHRFAM7AQ494W8 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CHRFAM7AQ494W8 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC13.62□□□□□ -0.23
CHRFAM7AQ494W8 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CHRFAM7AQ494W8 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC13.62□□□□□ -0.23
CHRFAM7AQ494W8 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
CHRFAM7AQ494W8 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC13.62□□□□□ -0.23
CHRFAM7AQ494W8 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CHRFAM7AQ494W8 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CHRFAM7AQ494W8 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CHRFAM7AQ494W8 AC011477.6-201ENST00000604980 1927 ntBASIC13.62□□□□□ -0.23
CHRFAM7AQ494W8 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CHRFAM7AQ494W8 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CHRFAM7AQ494W8 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC13.62□□□□□ -0.23
CHRFAM7AQ494W8 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CHRFAM7AQ494W8 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC13.62□□□□□ -0.23
CHRFAM7AQ494W8 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CHRFAM7AQ494W8 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CHRFAM7AQ494W8 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC13.62□□□□□ -0.23
CHRFAM7AQ494W8 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CHRFAM7AQ494W8 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
CHRFAM7AQ494W8 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CHRFAM7AQ494W8 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CHRFAM7AQ494W8 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC13.61□□□□□ -0.23
CHRFAM7AQ494W8 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CHRFAM7AQ494W8 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC13.61□□□□□ -0.23
CHRFAM7AQ494W8 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CHRFAM7AQ494W8 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
CHRFAM7AQ494W8 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
CHRFAM7AQ494W8 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
CHRFAM7AQ494W8 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CHRFAM7AQ494W8 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC13.61□□□□□ -0.23
CHRFAM7AQ494W8 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CHRFAM7AQ494W8 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC13.61□□□□□ -0.23
CHRFAM7AQ494W8 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
CHRFAM7AQ494W8 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CHRFAM7AQ494W8 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
CHRFAM7AQ494W8 RN7SL752P-201ENST00000463779 287 ntBASIC13.61□□□□□ -0.23
CHRFAM7AQ494W8 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC13.61□□□□□ -0.23
CHRFAM7AQ494W8 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC13.61□□□□□ -0.23
CHRFAM7AQ494W8 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
CHRFAM7AQ494W8 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CHRFAM7AQ494W8 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CHRFAM7AQ494W8 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
CHRFAM7AQ494W8 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
CHRFAM7AQ494W8 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CHRFAM7AQ494W8 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC13.61□□□□□ -0.23
CHRFAM7AQ494W8 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CHRFAM7AQ494W8 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
CHRFAM7AQ494W8 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC13.61□□□□□ -0.23
CHRFAM7AQ494W8 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC13.61□□□□□ -0.23
CHRFAM7AQ494W8 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC13.61□□□□□ -0.23
CHRFAM7AQ494W8 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CHRFAM7AQ494W8 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CHRFAM7AQ494W8 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC13.61□□□□□ -0.23
CHRFAM7AQ494W8 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CHRFAM7AQ494W8 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CHRFAM7AQ494W8 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
CHRFAM7AQ494W8 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 61.2 ms