Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC14.92□□□□□ -0.02
PCDH1Q08174 RFPL4AP1-201ENST00000530883 850 ntBASIC14.92□□□□□ -0.02
PCDH1Q08174 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC14.92□□□□□ -0.02
PCDH1Q08174 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC14.92□□□□□ -0.02
PCDH1Q08174 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC14.92□□□□□ -0.02
PCDH1Q08174 ZBTB45P1-201ENST00000452761 1456 ntBASIC14.92□□□□□ -0.02
PCDH1Q08174 AC012508.2-201ENST00000567613 1472 ntBASIC14.92□□□□□ -0.02
PCDH1Q08174 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC14.92□□□□□ -0.02
PCDH1Q08174 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PCDH1Q08174 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
PCDH1Q08174 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
PCDH1Q08174 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
PCDH1Q08174 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
PCDH1Q08174 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
PCDH1Q08174 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PCDH1Q08174 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PCDH1Q08174 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PCDH1Q08174 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
PCDH1Q08174 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC14.92□□□□□ -0.02
PCDH1Q08174 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
PCDH1Q08174 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
PCDH1Q08174 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC14.92□□□□□ -0.02
PCDH1Q08174 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC14.92□□□□□ -0.02
PCDH1Q08174 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PCDH1Q08174 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PCDH1Q08174 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
PCDH1Q08174 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
PCDH1Q08174 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PCDH1Q08174 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
PCDH1Q08174 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
PCDH1Q08174 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC14.91□□□□□ -0.02
PCDH1Q08174 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PCDH1Q08174 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
PCDH1Q08174 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
PCDH1Q08174 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PCDH1Q08174 GOLGA8DP-202ENST00000341390 2184 ntBASIC14.91□□□□□ -0.02
PCDH1Q08174 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
PCDH1Q08174 PCDHGB8P-201ENST00000502926 1973 ntBASIC14.91□□□□□ -0.02
PCDH1Q08174 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PCDH1Q08174 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
PCDH1Q08174 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
PCDH1Q08174 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
PCDH1Q08174 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
PCDH1Q08174 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
PCDH1Q08174 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PCDH1Q08174 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PCDH1Q08174 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
PCDH1Q08174 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PCDH1Q08174 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PCDH1Q08174 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
PCDH1Q08174 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC14.91□□□□□ -0.02
PCDH1Q08174 FAM8A3P-201ENST00000427218 844 ntBASIC14.91□□□□□ -0.02
PCDH1Q08174 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC14.91□□□□□ -0.02
PCDH1Q08174 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
PCDH1Q08174 IGHV3-42-201ENST00000520410 361 ntBASIC14.91□□□□□ -0.02
PCDH1Q08174 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC14.91□□□□□ -0.02
PCDH1Q08174 RARRES2P5-201ENST00000564013 466 ntBASIC14.91□□□□□ -0.02
PCDH1Q08174 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC14.91□□□□□ -0.02
PCDH1Q08174 AC027796.2-201ENST00000575326 344 ntBASIC14.91□□□□□ -0.02
PCDH1Q08174 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
PCDH1Q08174 AC106028.4-201ENST00000614509 607 ntBASIC14.91□□□□□ -0.02
PCDH1Q08174 AC093512.1-201ENST00000617969 520 ntBASIC14.91□□□□□ -0.02
PCDH1Q08174 AL390754.1-201ENST00000619088 582 ntBASIC14.91□□□□□ -0.02
PCDH1Q08174 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC14.91□□□□□ -0.02
PCDH1Q08174 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC14.91□□□□□ -0.02
PCDH1Q08174 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
PCDH1Q08174 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
PCDH1Q08174 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
PCDH1Q08174 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PCDH1Q08174 MARS-233ENST00000628866 2583 ntTSL 5 BASIC14.91□□□□□ -0.02
PCDH1Q08174 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
PCDH1Q08174 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PCDH1Q08174 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC14.91□□□□□ -0.02
PCDH1Q08174 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
PCDH1Q08174 REXO1L2P-201ENST00000425429 2069 ntBASIC14.91□□□□□ -0.02
PCDH1Q08174 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
PCDH1Q08174 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PCDH1Q08174 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
PCDH1Q08174 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PCDH1Q08174 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC14.9□□□□□ -0.02
PCDH1Q08174 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC14.9□□□□□ -0.02
PCDH1Q08174 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
PCDH1Q08174 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PCDH1Q08174 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
PCDH1Q08174 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PCDH1Q08174 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC14.9□□□□□ -0.02
PCDH1Q08174 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
PCDH1Q08174 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC14.9□□□□□ -0.02
PCDH1Q08174 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PCDH1Q08174 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PCDH1Q08174 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PCDH1Q08174 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PCDH1Q08174 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PCDH1Q08174 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
PCDH1Q08174 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
PCDH1Q08174 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
PCDH1Q08174 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC14.9□□□□□ -0.02
PCDH1Q08174 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC14.9□□□□□ -0.02
PCDH1Q08174 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC14.9□□□□□ -0.02
PCDH1Q08174 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms