Protein–RNA interactions for Protein: P98172

EFNB1, Ephrin-B1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1P98172 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC13.78□□□□□ -0.2
EFNB1P98172 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC13.78□□□□□ -0.2
EFNB1P98172 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC13.78□□□□□ -0.2
EFNB1P98172 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
EFNB1P98172 PRR29-209ENST00000582540 967 ntTSL 2 BASIC13.78□□□□□ -0.2
EFNB1P98172 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC13.78□□□□□ -0.2
EFNB1P98172 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC13.78□□□□□ -0.2
EFNB1P98172 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC13.78□□□□□ -0.2
EFNB1P98172 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC13.78□□□□□ -0.2
EFNB1P98172 MIR6069-201ENST00000620069 79 ntBASIC13.78□□□□□ -0.2
EFNB1P98172 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
EFNB1P98172 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC13.78□□□□□ -0.2
EFNB1P98172 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
EFNB1P98172 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
EFNB1P98172 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC13.78□□□□□ -0.2
EFNB1P98172 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
EFNB1P98172 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
EFNB1P98172 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
EFNB1P98172 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
EFNB1P98172 USP4-203ENST00000415188 1454 ntTSL 3 BASIC13.78□□□□□ -0.2
EFNB1P98172 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
EFNB1P98172 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
EFNB1P98172 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
EFNB1P98172 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
EFNB1P98172 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
EFNB1P98172 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
EFNB1P98172 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
EFNB1P98172 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
EFNB1P98172 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
EFNB1P98172 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
EFNB1P98172 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
EFNB1P98172 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
EFNB1P98172 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
EFNB1P98172 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
EFNB1P98172 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
EFNB1P98172 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.2
EFNB1P98172 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
EFNB1P98172 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
EFNB1P98172 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.2
EFNB1P98172 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.2
EFNB1P98172 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC13.77□□□□□ -0.2
EFNB1P98172 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
EFNB1P98172 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
EFNB1P98172 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
EFNB1P98172 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
EFNB1P98172 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
EFNB1P98172 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
EFNB1P98172 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
EFNB1P98172 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
EFNB1P98172 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
EFNB1P98172 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
EFNB1P98172 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC13.77□□□□□ -0.21
EFNB1P98172 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
EFNB1P98172 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC13.77□□□□□ -0.21
EFNB1P98172 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
EFNB1P98172 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC13.77□□□□□ -0.21
EFNB1P98172 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
EFNB1P98172 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
EFNB1P98172 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC13.77□□□□□ -0.21
EFNB1P98172 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
EFNB1P98172 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
EFNB1P98172 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
EFNB1P98172 HTR5BP-201ENST00000430851 1154 ntBASIC13.77□□□□□ -0.21
EFNB1P98172 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
EFNB1P98172 SPDYE14P-201ENST00000442619 822 ntBASIC13.77□□□□□ -0.21
EFNB1P98172 AL121723.1-201ENST00000445194 1519 ntBASIC13.77□□□□□ -0.21
EFNB1P98172 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
EFNB1P98172 PGAM5P1-201ENST00000518923 814 ntBASIC13.77□□□□□ -0.21
EFNB1P98172 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC13.77□□□□□ -0.21
EFNB1P98172 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC13.77□□□□□ -0.21
EFNB1P98172 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC13.77□□□□□ -0.21
EFNB1P98172 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
EFNB1P98172 AL359881.3-201ENST00000602640 1721 ntBASIC13.77□□□□□ -0.21
EFNB1P98172 AL360270.3-201ENST00000609118 1348 ntBASIC13.77□□□□□ -0.21
EFNB1P98172 AC003101.2-201ENST00000612557 442 ntBASIC13.77□□□□□ -0.21
EFNB1P98172 RAB34-224ENST00000636513 888 ntTSL 5 BASIC13.77□□□□□ -0.21
EFNB1P98172 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
EFNB1P98172 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
EFNB1P98172 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
EFNB1P98172 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC13.76□□□□□ -0.21
EFNB1P98172 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
EFNB1P98172 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
EFNB1P98172 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
EFNB1P98172 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
EFNB1P98172 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
EFNB1P98172 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC13.76□□□□□ -0.21
EFNB1P98172 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC13.76□□□□□ -0.21
EFNB1P98172 AL354702.1-201ENST00000442006 1960 ntBASIC13.76□□□□□ -0.21
EFNB1P98172 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
EFNB1P98172 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
EFNB1P98172 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC13.76□□□□□ -0.21
EFNB1P98172 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
EFNB1P98172 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC13.76□□□□□ -0.21
EFNB1P98172 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
EFNB1P98172 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
EFNB1P98172 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
EFNB1P98172 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC13.76□□□□□ -0.21
EFNB1P98172 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
EFNB1P98172 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
EFNB1P98172 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms