Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
CMC4P56277 AC015936.2-201ENST00000593177 259 ntBASIC11.49□□□□□ -0.57
CMC4P56277 AC107373.2-201ENST00000607735 490 ntBASIC11.49□□□□□ -0.57
CMC4P56277 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC11.49□□□□□ -0.57
CMC4P56277 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
CMC4P56277 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC11.49□□□□□ -0.57
CMC4P56277 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
CMC4P56277 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC11.49□□□□□ -0.57
CMC4P56277 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
CMC4P56277 AP003680.1-201ENST00000598970 3660 ntBASIC11.49□□□□□ -0.57
CMC4P56277 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC11.49□□□□□ -0.57
CMC4P56277 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC11.49□□□□□ -0.57
CMC4P56277 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
CMC4P56277 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
CMC4P56277 CICP13-201ENST00000422015 2789 ntBASIC11.49□□□□□ -0.57
CMC4P56277 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC11.49□□□□□ -0.57
CMC4P56277 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
CMC4P56277 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
CMC4P56277 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC11.49□□□□□ -0.57
CMC4P56277 AC022532.1-201ENST00000624563 1728 ntBASIC11.49□□□□□ -0.57
CMC4P56277 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
CMC4P56277 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
CMC4P56277 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
CMC4P56277 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC11.48□□□□□ -0.57
CMC4P56277 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
CMC4P56277 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
CMC4P56277 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC11.48□□□□□ -0.57
CMC4P56277 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
CMC4P56277 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
CMC4P56277 CEP68-202ENST00000377990 5847 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
CMC4P56277 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC11.48□□□□□ -0.57
CMC4P56277 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
CMC4P56277 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC11.48□□□□□ -0.57
CMC4P56277 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
CMC4P56277 CALY-203ENST00000368558 825 ntTSL 5 BASIC11.48□□□□□ -0.57
CMC4P56277 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
CMC4P56277 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
CMC4P56277 DGCR5-201ENST00000399539 862 ntBASIC11.48□□□□□ -0.57
CMC4P56277 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC11.48□□□□□ -0.57
CMC4P56277 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC11.48□□□□□ -0.57
CMC4P56277 ACTG1P3-201ENST00000431775 1114 ntBASIC11.48□□□□□ -0.57
CMC4P56277 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC11.48□□□□□ -0.57
CMC4P56277 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC11.48□□□□□ -0.57
CMC4P56277 LHX6-205ENST00000464484 666 ntTSL 2 BASIC11.48□□□□□ -0.57
CMC4P56277 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC11.48□□□□□ -0.57
CMC4P56277 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC11.48□□□□□ -0.57
CMC4P56277 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC11.48□□□□□ -0.57
CMC4P56277 PTP4A1P2-201ENST00000546033 454 ntBASIC11.48□□□□□ -0.57
CMC4P56277 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
CMC4P56277 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC11.48□□□□□ -0.57
CMC4P56277 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC11.48□□□□□ -0.57
CMC4P56277 AL359711.2-201ENST00000563105 872 ntBASIC11.48□□□□□ -0.57
CMC4P56277 IFT20-206ENST00000578122 834 ntTSL 2 BASIC11.48□□□□□ -0.57
CMC4P56277 IFT20-208ENST00000578985 831 ntTSL 3 BASIC11.48□□□□□ -0.57
CMC4P56277 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC11.48□□□□□ -0.57
CMC4P56277 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC11.48□□□□□ -0.57
CMC4P56277 CECR7-204ENST00000609932 568 ntTSL 2 BASIC11.48□□□□□ -0.57
CMC4P56277 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC11.48□□□□□ -0.57
CMC4P56277 METTL26-214ENST00000614890 801 ntTSL 3 BASIC11.48□□□□□ -0.57
CMC4P56277 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
CMC4P56277 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
CMC4P56277 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
CMC4P56277 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC11.48□□□□□ -0.57
CMC4P56277 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC11.48□□□□□ -0.57
CMC4P56277 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
CMC4P56277 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC11.48□□□□□ -0.57
CMC4P56277 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC11.48□□□□□ -0.57
CMC4P56277 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
CMC4P56277 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
CMC4P56277 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
CMC4P56277 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
CMC4P56277 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC11.48□□□□□ -0.57
CMC4P56277 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
CMC4P56277 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
CMC4P56277 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC11.48□□□□□ -0.57
CMC4P56277 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC11.48□□□□□ -0.57
CMC4P56277 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC11.48□□□□□ -0.57
CMC4P56277 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC11.48□□□□□ -0.57
CMC4P56277 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC11.48□□□□□ -0.57
CMC4P56277 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
CMC4P56277 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
CMC4P56277 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
CMC4P56277 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC11.48□□□□□ -0.57
CMC4P56277 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
CMC4P56277 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
CMC4P56277 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
CMC4P56277 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
CMC4P56277 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC11.47□□□□□ -0.57
CMC4P56277 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
CMC4P56277 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC11.47□□□□□ -0.57
CMC4P56277 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
CMC4P56277 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC11.47□□□□□ -0.57
CMC4P56277 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
CMC4P56277 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
CMC4P56277 CNTN2-201ENST00000331830 7999 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
CMC4P56277 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
CMC4P56277 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC11.47□□□□□ -0.57
CMC4P56277 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
CMC4P56277 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC11.47□□□□□ -0.57
CMC4P56277 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC11.47□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms