Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SUMO3P55854 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SUMO3P55854 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SUMO3P55854 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
SUMO3P55854 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
SUMO3P55854 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC13.94□□□□□ -0.18
SUMO3P55854 AP006294.1-201ENST00000415407 339 ntBASIC13.94□□□□□ -0.18
SUMO3P55854 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC13.94□□□□□ -0.18
SUMO3P55854 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SUMO3P55854 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SUMO3P55854 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
SUMO3P55854 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC13.94□□□□□ -0.18
SUMO3P55854 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SUMO3P55854 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC13.94□□□□□ -0.18
SUMO3P55854 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
SUMO3P55854 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
SUMO3P55854 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
SUMO3P55854 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC13.94□□□□□ -0.18
SUMO3P55854 NEU3-203ENST00000529024 581 ntTSL 3 BASIC13.94□□□□□ -0.18
SUMO3P55854 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SUMO3P55854 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC13.94□□□□□ -0.18
SUMO3P55854 CTBP2P3-201ENST00000585629 1255 ntBASIC13.94□□□□□ -0.18
SUMO3P55854 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SUMO3P55854 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC13.94□□□□□ -0.18
SUMO3P55854 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC13.94□□□□□ -0.18
SUMO3P55854 CU634019.7-201ENST00000624153 1185 ntBASIC13.94□□□□□ -0.18
SUMO3P55854 FP236241.2-201ENST00000624906 1185 ntBASIC13.94□□□□□ -0.18
SUMO3P55854 AL603764.1-201ENST00000636452 321 ntBASIC13.94□□□□□ -0.18
SUMO3P55854 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
SUMO3P55854 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SUMO3P55854 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC13.94□□□□□ -0.18
SUMO3P55854 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SUMO3P55854 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SUMO3P55854 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC13.94□□□□□ -0.18
SUMO3P55854 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
SUMO3P55854 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC13.94□□□□□ -0.18
SUMO3P55854 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SUMO3P55854 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
SUMO3P55854 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
SUMO3P55854 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SUMO3P55854 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC13.94□□□□□ -0.18
SUMO3P55854 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
SUMO3P55854 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SUMO3P55854 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
SUMO3P55854 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SUMO3P55854 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SUMO3P55854 AL158070.2-201ENST00000623713 1621 ntBASIC13.93□□□□□ -0.18
SUMO3P55854 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SUMO3P55854 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SUMO3P55854 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
SUMO3P55854 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SUMO3P55854 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC13.93□□□□□ -0.18
SUMO3P55854 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SUMO3P55854 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
SUMO3P55854 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
SUMO3P55854 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC13.93□□□□□ -0.18
SUMO3P55854 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC13.93□□□□□ -0.18
SUMO3P55854 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC13.93□□□□□ -0.18
SUMO3P55854 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC13.93□□□□□ -0.18
SUMO3P55854 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC13.93□□□□□ -0.18
SUMO3P55854 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
SUMO3P55854 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SUMO3P55854 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC13.93□□□□□ -0.18
SUMO3P55854 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC13.93□□□□□ -0.18
SUMO3P55854 ACKR1-201ENST00000368121 1240 ntBASIC13.93□□□□□ -0.18
SUMO3P55854 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SUMO3P55854 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
SUMO3P55854 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SUMO3P55854 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
SUMO3P55854 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC13.93□□□□□ -0.18
SUMO3P55854 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SUMO3P55854 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC13.93□□□□□ -0.18
SUMO3P55854 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC13.93□□□□□ -0.18
SUMO3P55854 AC114812.1-204ENST00000449669 728 ntBASIC13.93□□□□□ -0.18
SUMO3P55854 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC13.93□□□□□ -0.18
SUMO3P55854 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SUMO3P55854 AP001582.1-201ENST00000525856 295 ntBASIC13.93□□□□□ -0.18
SUMO3P55854 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC13.93□□□□□ -0.18
SUMO3P55854 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC13.93□□□□□ -0.18
SUMO3P55854 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
SUMO3P55854 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC13.93□□□□□ -0.18
SUMO3P55854 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC13.93□□□□□ -0.18
SUMO3P55854 AP001063.1-201ENST00000568332 529 ntBASIC13.93□□□□□ -0.18
SUMO3P55854 AC009486.1-201ENST00000569860 813 ntBASIC13.93□□□□□ -0.18
SUMO3P55854 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
SUMO3P55854 METTL26-214ENST00000614890 801 ntTSL 3 BASIC13.93□□□□□ -0.18
SUMO3P55854 AP005019.2-201ENST00000615104 511 ntBASIC13.93□□□□□ -0.18
SUMO3P55854 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC13.93□□□□□ -0.18
SUMO3P55854 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SUMO3P55854 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
SUMO3P55854 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SUMO3P55854 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SUMO3P55854 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SUMO3P55854 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC13.93□□□□□ -0.18
SUMO3P55854 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
SUMO3P55854 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SUMO3P55854 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
SUMO3P55854 AC011270.2-201ENST00000624293 2550 ntBASIC13.93□□□□□ -0.18
SUMO3P55854 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC13.93□□□□□ -0.18
SUMO3P55854 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms