Protein–RNA interactions for Protein: P52954

LBX1, Transcription factor LBX1, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LBX1P52954 AC080013.5-201ENST00000607044 679 ntBASIC16.97■□□□□ 0.31
LBX1P52954 AL118522.1-201ENST00000611368 560 ntBASIC16.97■□□□□ 0.31
LBX1P52954 IDH3A-224ENST00000629769 114 ntTSL 5 BASIC16.97■□□□□ 0.31
LBX1P52954 HLF-202ENST00000430986 1385 ntTSL 2 BASIC16.97■□□□□ 0.31
LBX1P52954 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LBX1P52954 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
LBX1P52954 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
LBX1P52954 AC025183.3-201ENST00000623526 1482 ntBASIC16.97■□□□□ 0.31
LBX1P52954 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
LBX1P52954 CYP4F23P-201ENST00000593402 1579 ntBASIC16.97■□□□□ 0.31
LBX1P52954 MCC-208ENST00000514701 2855 ntTSL 2 BASIC16.97■□□□□ 0.31
LBX1P52954 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC16.97■□□□□ 0.31
LBX1P52954 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LBX1P52954 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC16.97■□□□□ 0.31
LBX1P52954 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
LBX1P52954 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
LBX1P52954 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC16.96■□□□□ 0.31
LBX1P52954 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
LBX1P52954 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
LBX1P52954 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
LBX1P52954 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
LBX1P52954 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
LBX1P52954 CHTF8-202ENST00000398235 1073 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
LBX1P52954 EFNA4-203ENST00000427683 1052 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
LBX1P52954 AL512306.1-201ENST00000432698 848 ntBASIC16.96■□□□□ 0.31
LBX1P52954 MAGEA7P-201ENST00000436482 942 ntBASIC16.96■□□□□ 0.31
LBX1P52954 CSNK1G2P1-201ENST00000442675 955 ntBASIC16.96■□□□□ 0.31
LBX1P52954 AC009065.6-201ENST00000568795 456 ntTSL 2 BASIC16.96■□□□□ 0.31
LBX1P52954 AC009163.5-202ENST00000571737 466 ntTSL 3 BASIC16.96■□□□□ 0.31
LBX1P52954 AC025048.2-201ENST00000590744 786 ntTSL 2 BASIC16.96■□□□□ 0.31
LBX1P52954 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC16.96■□□□□ 0.31
LBX1P52954 CADM1-221ENST00000612235 1042 ntTSL 5 BASIC16.96■□□□□ 0.31
LBX1P52954 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC16.96■□□□□ 0.31
LBX1P52954 BLACE-202ENST00000616210 540 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
LBX1P52954 AL109809.1-201ENST00000418979 1367 ntBASIC16.96■□□□□ 0.31
LBX1P52954 DNMT3L-204ENST00000628202 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
LBX1P52954 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
LBX1P52954 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
LBX1P52954 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LBX1P52954 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
LBX1P52954 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LBX1P52954 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
LBX1P52954 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LBX1P52954 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
LBX1P52954 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LBX1P52954 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LBX1P52954 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.3
LBX1P52954 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
LBX1P52954 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC16.96■□□□□ 0.3
LBX1P52954 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC16.96■□□□□ 0.3
LBX1P52954 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.3
LBX1P52954 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
LBX1P52954 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
LBX1P52954 AC005906.2-205ENST00000640862 1522 ntTSL 5 BASIC16.96■□□□□ 0.3
LBX1P52954 DHRS7-209ENST00000557185 1322 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
LBX1P52954 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
LBX1P52954 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC16.95■□□□□ 0.3
LBX1P52954 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LBX1P52954 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
LBX1P52954 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LBX1P52954 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC16.95■□□□□ 0.3
LBX1P52954 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LBX1P52954 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC16.95■□□□□ 0.3
LBX1P52954 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LBX1P52954 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
LBX1P52954 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
LBX1P52954 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
LBX1P52954 OXA1L-212ENST00000604262 1571 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LBX1P52954 COLQ-202ENST00000383786 1482 ntTSL 5 BASIC16.95■□□□□ 0.3
LBX1P52954 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
LBX1P52954 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LBX1P52954 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC16.95■□□□□ 0.3
LBX1P52954 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LBX1P52954 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
LBX1P52954 KRT8P30-201ENST00000432100 650 ntBASIC16.95■□□□□ 0.3
LBX1P52954 AC006372.2-201ENST00000433660 292 ntTSL 3 BASIC16.95■□□□□ 0.3
LBX1P52954 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
LBX1P52954 ERP29P1-201ENST00000442902 706 ntBASIC16.95■□□□□ 0.3
LBX1P52954 CITED1-209ENST00000453707 998 ntAPPRIS ALT2 TSL 3 BASIC16.95■□□□□ 0.3
LBX1P52954 ALG1L3P-201ENST00000503331 765 ntBASIC16.95■□□□□ 0.3
LBX1P52954 LINC02063-201ENST00000503415 566 ntTSL 4 BASIC16.95■□□□□ 0.3
LBX1P52954 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC16.95■□□□□ 0.3
LBX1P52954 IKBKB-223ENST00000522147 954 ntTSL 5 BASIC16.95■□□□□ 0.3
LBX1P52954 C11orf58-207ENST00000525684 575 ntTSL 2 BASIC16.95■□□□□ 0.3
LBX1P52954 C11orf58-209ENST00000528634 776 ntTSL 5 BASIC16.95■□□□□ 0.3
LBX1P52954 ORAOV1-205ENST00000535657 709 ntAPPRIS P2 TSL 3 BASIC16.95■□□□□ 0.3
LBX1P52954 AC093510.1-202ENST00000546238 442 ntTSL 3 BASIC16.95■□□□□ 0.3
LBX1P52954 TMEM202-AS1-201ENST00000562573 723 ntTSL 3 BASIC16.95■□□□□ 0.3
LBX1P52954 AP001043.1-206ENST00000613045 730 ntTSL 5 BASIC16.95■□□□□ 0.3
LBX1P52954 RPL13A-213ENST00000621674 1098 ntTSL 5 BASIC16.95■□□□□ 0.3
LBX1P52954 AC027559.1-203ENST00000635726 517 ntTSL 5 BASIC16.95■□□□□ 0.3
LBX1P52954 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LBX1P52954 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC16.95■□□□□ 0.3
LBX1P52954 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
LBX1P52954 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
LBX1P52954 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
LBX1P52954 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
LBX1P52954 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
LBX1P52954 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LBX1P52954 COQ3-201ENST00000254759 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms