Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
CPT1AP50416 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
CPT1AP50416 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC16.93■□□□□ 0.3
CPT1AP50416 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
CPT1AP50416 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CPT1AP50416 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC16.93■□□□□ 0.3
CPT1AP50416 KRT8P29-201ENST00000420409 1371 ntBASIC16.93■□□□□ 0.3
CPT1AP50416 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CPT1AP50416 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CPT1AP50416 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CPT1AP50416 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC16.93■□□□□ 0.3
CPT1AP50416 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC16.93■□□□□ 0.3
CPT1AP50416 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CPT1AP50416 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC16.93■□□□□ 0.3
CPT1AP50416 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
CPT1AP50416 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC16.93■□□□□ 0.3
CPT1AP50416 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC16.93■□□□□ 0.3
CPT1AP50416 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC16.93■□□□□ 0.3
CPT1AP50416 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC16.93■□□□□ 0.3
CPT1AP50416 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CPT1AP50416 AC105129.2-201ENST00000559536 390 ntBASIC16.93■□□□□ 0.3
CPT1AP50416 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC16.93■□□□□ 0.3
CPT1AP50416 KLK3-207ENST00000595952 969 ntTSL 3 BASIC16.93■□□□□ 0.3
CPT1AP50416 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC16.93■□□□□ 0.3
CPT1AP50416 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CPT1AP50416 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC16.93■□□□□ 0.3
CPT1AP50416 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CPT1AP50416 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC16.93■□□□□ 0.3
CPT1AP50416 REXO1L5P-201ENST00000622260 2098 ntBASIC16.93■□□□□ 0.3
CPT1AP50416 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CPT1AP50416 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
CPT1AP50416 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC16.93■□□□□ 0.3
CPT1AP50416 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC16.92■□□□□ 0.3
CPT1AP50416 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC16.92■□□□□ 0.3
CPT1AP50416 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
CPT1AP50416 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CPT1AP50416 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CPT1AP50416 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CPT1AP50416 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CPT1AP50416 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC16.92■□□□□ 0.3
CPT1AP50416 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
CPT1AP50416 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
CPT1AP50416 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
CPT1AP50416 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CPT1AP50416 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CPT1AP50416 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
CPT1AP50416 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CPT1AP50416 CYP46A4P-201ENST00000414953 267 ntBASIC16.92■□□□□ 0.3
CPT1AP50416 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CPT1AP50416 MDH2-205ENST00000461263 648 ntTSL 2 BASIC16.92■□□□□ 0.3
CPT1AP50416 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CPT1AP50416 AC079328.1-201ENST00000560358 952 ntBASIC16.92■□□□□ 0.3
CPT1AP50416 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC16.92■□□□□ 0.3
CPT1AP50416 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC16.92■□□□□ 0.3
CPT1AP50416 CU633904.3-201ENST00000624042 1029 ntBASIC16.92■□□□□ 0.3
CPT1AP50416 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
CPT1AP50416 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
CPT1AP50416 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CPT1AP50416 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC16.92■□□□□ 0.3
CPT1AP50416 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CPT1AP50416 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CPT1AP50416 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC16.92■□□□□ 0.3
CPT1AP50416 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CPT1AP50416 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CPT1AP50416 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CPT1AP50416 AC010491.1-201ENST00000563101 2797 ntBASIC16.92■□□□□ 0.3
CPT1AP50416 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
CPT1AP50416 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CPT1AP50416 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC16.92■□□□□ 0.3
CPT1AP50416 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CPT1AP50416 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CPT1AP50416 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
CPT1AP50416 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
CPT1AP50416 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CPT1AP50416 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC16.91■□□□□ 0.3
CPT1AP50416 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CPT1AP50416 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
CPT1AP50416 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
CPT1AP50416 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
CPT1AP50416 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CPT1AP50416 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
CPT1AP50416 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC16.91■□□□□ 0.3
CPT1AP50416 AP000593.2-201ENST00000542775 1433 ntBASIC16.91■□□□□ 0.3
CPT1AP50416 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CPT1AP50416 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC16.91■□□□□ 0.3
CPT1AP50416 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
CPT1AP50416 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CPT1AP50416 RN7SL769P-201ENST00000469386 295 ntBASIC16.91■□□□□ 0.3
CPT1AP50416 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC16.91■□□□□ 0.3
CPT1AP50416 AC106794.1-201ENST00000506935 792 ntBASIC16.91■□□□□ 0.3
CPT1AP50416 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CPT1AP50416 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC16.91■□□□□ 0.3
CPT1AP50416 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC16.91■□□□□ 0.3
CPT1AP50416 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CPT1AP50416 AC004466.1-201ENST00000599515 1080 ntBASIC16.91■□□□□ 0.3
CPT1AP50416 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC16.91■□□□□ 0.3
CPT1AP50416 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC16.91■□□□□ 0.3
CPT1AP50416 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CPT1AP50416 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
CPT1AP50416 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 61.9 ms