Protein–RNA interactions for Protein: P49768

PSEN1, Presenilin-1, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1P49768 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PSEN1P49768 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC16.61■□□□□ 0.25
PSEN1P49768 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC16.61■□□□□ 0.25
PSEN1P49768 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PSEN1P49768 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PSEN1P49768 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PSEN1P49768 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
PSEN1P49768 AL035633.1-201ENST00000406139 838 ntBASIC16.61■□□□□ 0.25
PSEN1P49768 AC087499.6-201ENST00000411576 835 ntBASIC16.61■□□□□ 0.25
PSEN1P49768 AC012513.1-201ENST00000417481 784 ntTSL 2 BASIC16.61■□□□□ 0.25
PSEN1P49768 CRB3P1-201ENST00000449338 276 ntBASIC16.61■□□□□ 0.25
PSEN1P49768 AC010834.3-201ENST00000520562 939 ntTSL 3 BASIC16.61■□□□□ 0.25
PSEN1P49768 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC16.61■□□□□ 0.25
PSEN1P49768 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC16.61■□□□□ 0.25
PSEN1P49768 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC16.61■□□□□ 0.25
PSEN1P49768 ARL16-202ENST00000570561 768 ntTSL 2 BASIC16.61■□□□□ 0.25
PSEN1P49768 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
PSEN1P49768 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PSEN1P49768 AL355860.1-201ENST00000636087 1229 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
PSEN1P49768 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC16.61■□□□□ 0.25
PSEN1P49768 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC16.61■□□□□ 0.25
PSEN1P49768 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC16.61■□□□□ 0.25
PSEN1P49768 AC069224.1-201ENST00000566372 1715 ntBASIC16.61■□□□□ 0.25
PSEN1P49768 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC16.61■□□□□ 0.25
PSEN1P49768 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PSEN1P49768 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
PSEN1P49768 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PSEN1P49768 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PSEN1P49768 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC16.61■□□□□ 0.25
PSEN1P49768 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PSEN1P49768 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC16.61■□□□□ 0.25
PSEN1P49768 GABPB1-201ENST00000220429 2726 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PSEN1P49768 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
PSEN1P49768 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
PSEN1P49768 SYDE1-201ENST00000342784 3264 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
PSEN1P49768 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
PSEN1P49768 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PSEN1P49768 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC16.6■□□□□ 0.25
PSEN1P49768 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PSEN1P49768 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC16.6■□□□□ 0.25
PSEN1P49768 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PSEN1P49768 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC16.6■□□□□ 0.25
PSEN1P49768 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PSEN1P49768 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
PSEN1P49768 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PSEN1P49768 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
PSEN1P49768 SPDYE19P-201ENST00000338590 713 ntBASIC16.6■□□□□ 0.25
PSEN1P49768 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PSEN1P49768 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
PSEN1P49768 OSM-203ENST00000403463 464 ntTSL 3 BASIC16.6■□□□□ 0.25
PSEN1P49768 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC16.6■□□□□ 0.25
PSEN1P49768 TARDBPP1-201ENST00000442013 1203 ntBASIC16.6■□□□□ 0.25
PSEN1P49768 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC16.6■□□□□ 0.25
PSEN1P49768 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC16.6■□□□□ 0.25
PSEN1P49768 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC16.6■□□□□ 0.25
PSEN1P49768 RHOA-206ENST00000454011 889 ntTSL 2 BASIC16.6■□□□□ 0.25
PSEN1P49768 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PSEN1P49768 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC16.6■□□□□ 0.25
PSEN1P49768 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
PSEN1P49768 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PSEN1P49768 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC16.6■□□□□ 0.25
PSEN1P49768 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
PSEN1P49768 AL021368.1-201ENST00000607490 540 ntBASIC16.6■□□□□ 0.25
PSEN1P49768 TCEAL4-213ENST00000613326 1166 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
PSEN1P49768 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PSEN1P49768 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PSEN1P49768 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PSEN1P49768 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PSEN1P49768 RNH1-224ENST00000534797 2973 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PSEN1P49768 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC16.6■□□□□ 0.25
PSEN1P49768 DEK-201ENST00000244776 1441 ntTSL 2 BASIC16.6■□□□□ 0.25
PSEN1P49768 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
PSEN1P49768 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PSEN1P49768 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
PSEN1P49768 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PSEN1P49768 SFRP1-202ENST00000379845 3873 ntTSL 2 BASIC16.6■□□□□ 0.25
PSEN1P49768 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PSEN1P49768 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PSEN1P49768 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PSEN1P49768 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC16.6■□□□□ 0.25
PSEN1P49768 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC16.6■□□□□ 0.25
PSEN1P49768 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PSEN1P49768 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
PSEN1P49768 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PSEN1P49768 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC16.59■□□□□ 0.25
PSEN1P49768 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
PSEN1P49768 AC073347.1-201ENST00000421633 2643 ntBASIC16.59■□□□□ 0.25
PSEN1P49768 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PSEN1P49768 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
PSEN1P49768 COL6A4P2-202ENST00000504443 2753 ntBASIC16.59■□□□□ 0.25
PSEN1P49768 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
PSEN1P49768 STK24-203ENST00000397517 4578 ntTSL 2 BASIC16.59■□□□□ 0.25
PSEN1P49768 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
PSEN1P49768 TNPO2-218ENST00000592287 2914 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
PSEN1P49768 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PSEN1P49768 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
PSEN1P49768 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PSEN1P49768 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PSEN1P49768 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC16.59■□□□□ 0.25
PSEN1P49768 ZRANB2-AS1-201ENST00000426999 607 ntTSL 3 BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms