Protein–RNA interactions for Protein: P49662

CASP4, Caspase-4, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4P49662 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CASP4P49662 WASH3P-207ENST00000560956 1394 ntBASIC16.81■□□□□ 0.28
CASP4P49662 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CASP4P49662 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CASP4P49662 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CASP4P49662 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CASP4P49662 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CASP4P49662 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CASP4P49662 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
CASP4P49662 DFFBP1-201ENST00000433250 979 ntBASIC16.81■□□□□ 0.28
CASP4P49662 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CASP4P49662 AC026410.3-201ENST00000514280 936 ntBASIC16.81■□□□□ 0.28
CASP4P49662 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC16.81■□□□□ 0.28
CASP4P49662 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC16.81■□□□□ 0.28
CASP4P49662 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC16.81■□□□□ 0.28
CASP4P49662 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CASP4P49662 AC190387.1-201ENST00000551683 408 ntBASIC16.81■□□□□ 0.28
CASP4P49662 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC16.81■□□□□ 0.28
CASP4P49662 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC16.81■□□□□ 0.28
CASP4P49662 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC16.81■□□□□ 0.28
CASP4P49662 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC16.81■□□□□ 0.28
CASP4P49662 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC16.81■□□□□ 0.28
CASP4P49662 BRI3BPP1-201ENST00000594224 787 ntBASIC16.81■□□□□ 0.28
CASP4P49662 AC107373.2-201ENST00000607735 490 ntBASIC16.81■□□□□ 0.28
CASP4P49662 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC16.81■□□□□ 0.28
CASP4P49662 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC16.81■□□□□ 0.28
CASP4P49662 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CASP4P49662 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CASP4P49662 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
CASP4P49662 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CASP4P49662 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CASP4P49662 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CASP4P49662 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CASP4P49662 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC16.81■□□□□ 0.28
CASP4P49662 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CASP4P49662 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
CASP4P49662 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC16.81■□□□□ 0.28
CASP4P49662 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
CASP4P49662 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CASP4P49662 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
CASP4P49662 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC16.8■□□□□ 0.28
CASP4P49662 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC16.8■□□□□ 0.28
CASP4P49662 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC16.8■□□□□ 0.28
CASP4P49662 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC16.8■□□□□ 0.28
CASP4P49662 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
CASP4P49662 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CASP4P49662 ANKRD26P3-201ENST00000454044 2748 ntBASIC16.8■□□□□ 0.28
CASP4P49662 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CASP4P49662 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
CASP4P49662 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CASP4P49662 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC16.8■□□□□ 0.28
CASP4P49662 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
CASP4P49662 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CASP4P49662 METTL26-204ENST00000397665 558 ntTSL 2 BASIC16.8■□□□□ 0.28
CASP4P49662 MEP1AP4-201ENST00000423244 1087 ntBASIC16.8■□□□□ 0.28
CASP4P49662 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC16.8■□□□□ 0.28
CASP4P49662 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC16.8■□□□□ 0.28
CASP4P49662 TERF1P3-201ENST00000505638 1227 ntBASIC16.8■□□□□ 0.28
CASP4P49662 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC16.8■□□□□ 0.28
CASP4P49662 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC16.8■□□□□ 0.28
CASP4P49662 AC123567.1-201ENST00000548294 1261 ntBASIC16.8■□□□□ 0.28
CASP4P49662 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC16.8■□□□□ 0.28
CASP4P49662 WASH4P-201ENST00000564273 1246 ntBASIC16.8■□□□□ 0.28
CASP4P49662 RRP7BP-205ENST00000566851 833 ntBASIC16.8■□□□□ 0.28
CASP4P49662 SAMD11P1-201ENST00000571429 661 ntBASIC16.8■□□□□ 0.28
CASP4P49662 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC16.8■□□□□ 0.28
CASP4P49662 AC092364.2-202ENST00000597012 1073 ntBASIC16.8■□□□□ 0.28
CASP4P49662 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC16.8■□□□□ 0.28
CASP4P49662 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CASP4P49662 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CASP4P49662 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CASP4P49662 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CASP4P49662 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CASP4P49662 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CASP4P49662 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CASP4P49662 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
CASP4P49662 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC16.8■□□□□ 0.28
CASP4P49662 AMT-232ENST00000636199 1546 ntTSL 5 BASIC16.8■□□□□ 0.28
CASP4P49662 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
CASP4P49662 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
CASP4P49662 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CASP4P49662 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CASP4P49662 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CASP4P49662 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
CASP4P49662 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CASP4P49662 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CASP4P49662 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CASP4P49662 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
CASP4P49662 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CASP4P49662 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
CASP4P49662 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CASP4P49662 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CASP4P49662 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
CASP4P49662 CALY-202ENST00000368555 783 ntTSL 2 BASIC16.79■□□□□ 0.28
CASP4P49662 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
CASP4P49662 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC16.79■□□□□ 0.28
CASP4P49662 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC16.79■□□□□ 0.28
CASP4P49662 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC16.79■□□□□ 0.28
CASP4P49662 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC16.79■□□□□ 0.28
CASP4P49662 POLD4-211ENST00000539074 714 ntTSL 3 BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 60.2 ms