Protein–RNA interactions for Protein: P41238

APOBEC1, C->U-editing enzyme APOBEC-1, humanhuman

Known RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1P41238 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
APOBEC1P41238 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
APOBEC1P41238 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
APOBEC1P41238 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC13.97□□□□□ -0.17
APOBEC1P41238 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
APOBEC1P41238 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
APOBEC1P41238 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
APOBEC1P41238 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
APOBEC1P41238 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
APOBEC1P41238 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
APOBEC1P41238 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
APOBEC1P41238 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
APOBEC1P41238 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
APOBEC1P41238 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC13.96□□□□□ -0.17
APOBEC1P41238 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC13.96□□□□□ -0.17
APOBEC1P41238 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
APOBEC1P41238 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
APOBEC1P41238 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
APOBEC1P41238 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
APOBEC1P41238 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
APOBEC1P41238 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
APOBEC1P41238 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
APOBEC1P41238 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
APOBEC1P41238 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
APOBEC1P41238 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
APOBEC1P41238 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC13.96□□□□□ -0.17
APOBEC1P41238 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC13.96□□□□□ -0.17
APOBEC1P41238 AC126755.1-201ENST00000525846 6405 ntBASIC13.96□□□□□ -0.17
APOBEC1P41238 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC13.96□□□□□ -0.17
APOBEC1P41238 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
APOBEC1P41238 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
APOBEC1P41238 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC13.96□□□□□ -0.17
APOBEC1P41238 MIR661-201ENST00000384842 89 ntBASIC13.96□□□□□ -0.17
APOBEC1P41238 METTL26-204ENST00000397665 558 ntTSL 2 BASIC13.96□□□□□ -0.17
APOBEC1P41238 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC13.96□□□□□ -0.17
APOBEC1P41238 AC134915.1-201ENST00000426461 574 ntBASIC13.96□□□□□ -0.17
APOBEC1P41238 WDR53-203ENST00000429115 683 ntTSL 2 BASIC13.96□□□□□ -0.17
APOBEC1P41238 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC13.96□□□□□ -0.17
APOBEC1P41238 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC13.96□□□□□ -0.17
APOBEC1P41238 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC13.96□□□□□ -0.17
APOBEC1P41238 AC123567.1-201ENST00000548294 1261 ntBASIC13.96□□□□□ -0.17
APOBEC1P41238 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC13.96□□□□□ -0.17
APOBEC1P41238 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
APOBEC1P41238 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
APOBEC1P41238 SAMD11P1-201ENST00000571429 661 ntBASIC13.96□□□□□ -0.17
APOBEC1P41238 AC092364.2-202ENST00000597012 1073 ntBASIC13.96□□□□□ -0.17
APOBEC1P41238 TMEM261P1-201ENST00000604899 340 ntBASIC13.96□□□□□ -0.17
APOBEC1P41238 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC13.96□□□□□ -0.17
APOBEC1P41238 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
APOBEC1P41238 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC13.96□□□□□ -0.17
APOBEC1P41238 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC13.96□□□□□ -0.17
APOBEC1P41238 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
APOBEC1P41238 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
APOBEC1P41238 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
APOBEC1P41238 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.18
APOBEC1P41238 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.18
APOBEC1P41238 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC13.96□□□□□ -0.18
APOBEC1P41238 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
APOBEC1P41238 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC13.96□□□□□ -0.18
APOBEC1P41238 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC13.96□□□□□ -0.18
APOBEC1P41238 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC13.96□□□□□ -0.18
APOBEC1P41238 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC13.96□□□□□ -0.18
APOBEC1P41238 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC13.95□□□□□ -0.18
APOBEC1P41238 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC13.95□□□□□ -0.18
APOBEC1P41238 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC13.95□□□□□ -0.18
APOBEC1P41238 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
APOBEC1P41238 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC13.95□□□□□ -0.18
APOBEC1P41238 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
APOBEC1P41238 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
APOBEC1P41238 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC13.95□□□□□ -0.18
APOBEC1P41238 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
APOBEC1P41238 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
APOBEC1P41238 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC13.95□□□□□ -0.18
APOBEC1P41238 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
APOBEC1P41238 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
APOBEC1P41238 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC13.95□□□□□ -0.18
APOBEC1P41238 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
APOBEC1P41238 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
APOBEC1P41238 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
APOBEC1P41238 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
APOBEC1P41238 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
APOBEC1P41238 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
APOBEC1P41238 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
APOBEC1P41238 GOLGA6L11P-201ENST00000417252 1298 ntBASIC13.95□□□□□ -0.18
APOBEC1P41238 HMGN1P19-201ENST00000436976 333 ntBASIC13.95□□□□□ -0.18
APOBEC1P41238 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC13.95□□□□□ -0.18
APOBEC1P41238 VDAC1P7-201ENST00000462417 847 ntBASIC13.95□□□□□ -0.18
APOBEC1P41238 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC13.95□□□□□ -0.18
APOBEC1P41238 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC13.95□□□□□ -0.18
APOBEC1P41238 AC092552.1-201ENST00000547243 906 ntBASIC13.95□□□□□ -0.18
APOBEC1P41238 CDK4-206ENST00000549606 558 ntTSL 2 BASIC13.95□□□□□ -0.18
APOBEC1P41238 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC13.95□□□□□ -0.18
APOBEC1P41238 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC13.95□□□□□ -0.18
APOBEC1P41238 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC13.95□□□□□ -0.18
APOBEC1P41238 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC13.95□□□□□ -0.18
APOBEC1P41238 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
APOBEC1P41238 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC13.95□□□□□ -0.18
APOBEC1P41238 YTHDF3-AS1-201ENST00000603538 718 ntBASIC13.95□□□□□ -0.18
APOBEC1P41238 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC13.95□□□□□ -0.18
APOBEC1P41238 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 63.1 ms