Protein–RNA interactions for Protein: P37088

SCNN1A, Amiloride-sensitive sodium channel subunit alpha, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1AP37088 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
SCNN1AP37088 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
SCNN1AP37088 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SCNN1AP37088 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC15.99■□□□□ 0.15
SCNN1AP37088 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
SCNN1AP37088 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC15.99■□□□□ 0.15
SCNN1AP37088 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC15.99■□□□□ 0.15
SCNN1AP37088 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
SCNN1AP37088 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SCNN1AP37088 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC15.99■□□□□ 0.15
SCNN1AP37088 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
SCNN1AP37088 ZEB1-AS1-208ENST00000607166 2503 ntBASIC15.99■□□□□ 0.15
SCNN1AP37088 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SCNN1AP37088 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SCNN1AP37088 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
SCNN1AP37088 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC15.99■□□□□ 0.15
SCNN1AP37088 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC15.99■□□□□ 0.15
SCNN1AP37088 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC15.99■□□□□ 0.15
SCNN1AP37088 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC15.99■□□□□ 0.15
SCNN1AP37088 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
SCNN1AP37088 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC15.99■□□□□ 0.15
SCNN1AP37088 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
SCNN1AP37088 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC15.99■□□□□ 0.15
SCNN1AP37088 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC15.99■□□□□ 0.15
SCNN1AP37088 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
SCNN1AP37088 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SCNN1AP37088 ACTBP8-201ENST00000403258 1108 ntBASIC15.99■□□□□ 0.15
SCNN1AP37088 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC15.99■□□□□ 0.15
SCNN1AP37088 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC15.99■□□□□ 0.15
SCNN1AP37088 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
SCNN1AP37088 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
SCNN1AP37088 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
SCNN1AP37088 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC15.99■□□□□ 0.15
SCNN1AP37088 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
SCNN1AP37088 AL358472.5-202ENST00000641448 1267 ntBASIC15.99■□□□□ 0.15
SCNN1AP37088 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SCNN1AP37088 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC15.99■□□□□ 0.15
SCNN1AP37088 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SCNN1AP37088 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC15.99■□□□□ 0.15
SCNN1AP37088 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SCNN1AP37088 MARS-233ENST00000628866 2583 ntTSL 5 BASIC15.99■□□□□ 0.15
SCNN1AP37088 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SCNN1AP37088 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
SCNN1AP37088 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
SCNN1AP37088 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SCNN1AP37088 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
SCNN1AP37088 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
SCNN1AP37088 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SCNN1AP37088 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
SCNN1AP37088 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SCNN1AP37088 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SCNN1AP37088 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
SCNN1AP37088 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC15.98■□□□□ 0.15
SCNN1AP37088 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SCNN1AP37088 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
SCNN1AP37088 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SCNN1AP37088 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
SCNN1AP37088 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
SCNN1AP37088 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
SCNN1AP37088 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
SCNN1AP37088 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SCNN1AP37088 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
SCNN1AP37088 RNU1-114P-201ENST00000365297 166 ntBASIC15.98■□□□□ 0.15
SCNN1AP37088 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SCNN1AP37088 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SCNN1AP37088 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
SCNN1AP37088 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
SCNN1AP37088 KLF2P2-201ENST00000416807 1039 ntBASIC15.98■□□□□ 0.15
SCNN1AP37088 ACTG1P3-201ENST00000431775 1114 ntBASIC15.98■□□□□ 0.15
SCNN1AP37088 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC15.98■□□□□ 0.15
SCNN1AP37088 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
SCNN1AP37088 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC15.98■□□□□ 0.15
SCNN1AP37088 NEU3-203ENST00000529024 581 ntTSL 3 BASIC15.98■□□□□ 0.15
SCNN1AP37088 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SCNN1AP37088 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
SCNN1AP37088 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
SCNN1AP37088 KSR1-207ENST00000578981 748 ntTSL 4 BASIC15.98■□□□□ 0.15
SCNN1AP37088 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC15.98■□□□□ 0.15
SCNN1AP37088 ATF5-205ENST00000600336 682 ntTSL 2 BASIC15.98■□□□□ 0.15
SCNN1AP37088 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
SCNN1AP37088 LINC01101-201ENST00000622953 1884 ntBASIC15.98■□□□□ 0.15
SCNN1AP37088 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
SCNN1AP37088 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SCNN1AP37088 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SCNN1AP37088 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
SCNN1AP37088 ING5-213ENST00000636051 4199 ntTSL 5 BASIC15.98■□□□□ 0.15
SCNN1AP37088 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
SCNN1AP37088 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
SCNN1AP37088 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC15.98■□□□□ 0.15
SCNN1AP37088 AC144831.1-201ENST00000573312 2656 ntBASIC15.98■□□□□ 0.15
SCNN1AP37088 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
SCNN1AP37088 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC15.98■□□□□ 0.15
SCNN1AP37088 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC15.98■□□□□ 0.15
SCNN1AP37088 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SCNN1AP37088 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC15.98■□□□□ 0.15
SCNN1AP37088 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
SCNN1AP37088 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SCNN1AP37088 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
SCNN1AP37088 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC15.97■□□□□ 0.15
SCNN1AP37088 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms