Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC14.23□□□□□ -0.13
ABCD3P28288 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC14.23□□□□□ -0.13
ABCD3P28288 SRP9-204ENST00000619790 377 ntTSL 2 BASIC14.23□□□□□ -0.13
ABCD3P28288 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
ABCD3P28288 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ABCD3P28288 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ABCD3P28288 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ABCD3P28288 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ABCD3P28288 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC14.23□□□□□ -0.13
ABCD3P28288 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC14.23□□□□□ -0.13
ABCD3P28288 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
ABCD3P28288 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
ABCD3P28288 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC14.23□□□□□ -0.13
ABCD3P28288 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
ABCD3P28288 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ABCD3P28288 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
ABCD3P28288 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ABCD3P28288 AC092384.3-202ENST00000564646 2873 ntBASIC14.23□□□□□ -0.13
ABCD3P28288 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ABCD3P28288 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC14.23□□□□□ -0.13
ABCD3P28288 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC14.23□□□□□ -0.13
ABCD3P28288 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ABCD3P28288 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ABCD3P28288 KRT8P44-201ENST00000441609 1350 ntBASIC14.22□□□□□ -0.13
ABCD3P28288 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ABCD3P28288 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ABCD3P28288 DBET-201ENST00000630918 3363 ntBASIC14.22□□□□□ -0.13
ABCD3P28288 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ABCD3P28288 AC013268.4-201ENST00000637413 2228 ntBASIC14.22□□□□□ -0.13
ABCD3P28288 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
ABCD3P28288 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
ABCD3P28288 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
ABCD3P28288 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
ABCD3P28288 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
ABCD3P28288 AC126365.1-201ENST00000578585 1514 ntBASIC14.22□□□□□ -0.13
ABCD3P28288 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ABCD3P28288 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ABCD3P28288 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ABCD3P28288 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC14.22□□□□□ -0.13
ABCD3P28288 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ABCD3P28288 TEX30-203ENST00000376022 828 ntTSL 2 BASIC14.22□□□□□ -0.13
ABCD3P28288 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
ABCD3P28288 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ABCD3P28288 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
ABCD3P28288 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC14.22□□□□□ -0.13
ABCD3P28288 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
ABCD3P28288 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC14.22□□□□□ -0.13
ABCD3P28288 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC14.22□□□□□ -0.13
ABCD3P28288 AC011495.1-201ENST00000498085 584 ntBASIC14.22□□□□□ -0.13
ABCD3P28288 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC14.22□□□□□ -0.13
ABCD3P28288 GLI4-203ENST00000517468 963 ntTSL 5 BASIC14.22□□□□□ -0.13
ABCD3P28288 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC14.22□□□□□ -0.13
ABCD3P28288 ENPP7P5-201ENST00000541031 1031 ntBASIC14.22□□□□□ -0.13
ABCD3P28288 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
ABCD3P28288 POLE2-203ENST00000553805 496 ntTSL 2 BASIC14.22□□□□□ -0.13
ABCD3P28288 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
ABCD3P28288 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC14.22□□□□□ -0.13
ABCD3P28288 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
ABCD3P28288 AC005225.4-201ENST00000557330 545 ntBASIC14.22□□□□□ -0.13
ABCD3P28288 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC14.22□□□□□ -0.13
ABCD3P28288 AC104640.1-201ENST00000562617 2109 ntBASIC14.22□□□□□ -0.13
ABCD3P28288 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC14.22□□□□□ -0.13
ABCD3P28288 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC14.22□□□□□ -0.13
ABCD3P28288 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC14.22□□□□□ -0.13
ABCD3P28288 AC012645.4-201ENST00000610691 1061 ntBASIC14.22□□□□□ -0.13
ABCD3P28288 CU634019.7-201ENST00000624153 1185 ntBASIC14.22□□□□□ -0.13
ABCD3P28288 FP236241.2-201ENST00000624906 1185 ntBASIC14.22□□□□□ -0.13
ABCD3P28288 FES-204ENST00000414248 2327 ntTSL 2 BASIC14.22□□□□□ -0.13
ABCD3P28288 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
ABCD3P28288 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
ABCD3P28288 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ABCD3P28288 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
ABCD3P28288 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ABCD3P28288 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ABCD3P28288 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
ABCD3P28288 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ABCD3P28288 CU639417.3-201ENST00000624240 1404 ntBASIC14.22□□□□□ -0.13
ABCD3P28288 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
ABCD3P28288 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC14.22□□□□□ -0.13
ABCD3P28288 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ABCD3P28288 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
ABCD3P28288 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
ABCD3P28288 AC138035.3-201ENST00000622706 2791 ntBASIC14.22□□□□□ -0.13
ABCD3P28288 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ABCD3P28288 AC148477.4-201ENST00000613430 1793 ntBASIC14.22□□□□□ -0.13
ABCD3P28288 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ABCD3P28288 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC14.21□□□□□ -0.13
ABCD3P28288 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ABCD3P28288 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC14.21□□□□□ -0.13
ABCD3P28288 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
ABCD3P28288 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ABCD3P28288 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
ABCD3P28288 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC14.21□□□□□ -0.13
ABCD3P28288 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
ABCD3P28288 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
ABCD3P28288 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ABCD3P28288 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ABCD3P28288 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
ABCD3P28288 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC14.21□□□□□ -0.13
ABCD3P28288 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC14.21□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms