Protein–RNA interactions for Protein: P24863

CCNC, Cyclin-C, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNCP24863 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC15.72■□□□□ 0.11
CCNCP24863 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CCNCP24863 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC15.72■□□□□ 0.11
CCNCP24863 POR-201ENST00000394893 2532 ntTSL 5 BASIC15.72■□□□□ 0.11
CCNCP24863 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC15.72■□□□□ 0.11
CCNCP24863 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
CCNCP24863 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CCNCP24863 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CCNCP24863 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
CCNCP24863 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CCNCP24863 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
CCNCP24863 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CCNCP24863 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
CCNCP24863 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC15.72■□□□□ 0.11
CCNCP24863 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CCNCP24863 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CCNCP24863 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CCNCP24863 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
CCNCP24863 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CCNCP24863 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
CCNCP24863 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CCNCP24863 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
CCNCP24863 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCNCP24863 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC15.71■□□□□ 0.11
CCNCP24863 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC15.71■□□□□ 0.11
CCNCP24863 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
CCNCP24863 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCNCP24863 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCNCP24863 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCNCP24863 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCNCP24863 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCNCP24863 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
CCNCP24863 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCNCP24863 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC15.71■□□□□ 0.11
CCNCP24863 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCNCP24863 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCNCP24863 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CCNCP24863 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCNCP24863 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
CCNCP24863 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC15.71■□□□□ 0.11
CCNCP24863 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
CCNCP24863 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC15.71■□□□□ 0.11
CCNCP24863 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCNCP24863 PIN1P1-201ENST00000412108 996 ntBASIC15.71■□□□□ 0.11
CCNCP24863 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC15.71■□□□□ 0.11
CCNCP24863 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CCNCP24863 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC15.71■□□□□ 0.11
CCNCP24863 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCNCP24863 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC15.71■□□□□ 0.11
CCNCP24863 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
CCNCP24863 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC15.71■□□□□ 0.11
CCNCP24863 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
CCNCP24863 INTS4P2-202ENST00000614726 2019 ntBASIC15.71■□□□□ 0.11
CCNCP24863 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCNCP24863 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
CCNCP24863 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCNCP24863 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
CCNCP24863 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC15.71■□□□□ 0.11
CCNCP24863 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC15.71■□□□□ 0.11
CCNCP24863 PCDHGB8P-201ENST00000502926 1973 ntBASIC15.71■□□□□ 0.1
CCNCP24863 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
CCNCP24863 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
CCNCP24863 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
CCNCP24863 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCNCP24863 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCNCP24863 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCNCP24863 AC093525.8-201ENST00000624099 1342 ntBASIC15.7■□□□□ 0.1
CCNCP24863 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCNCP24863 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCNCP24863 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCNCP24863 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCNCP24863 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
CCNCP24863 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC15.7■□□□□ 0.1
CCNCP24863 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC15.7■□□□□ 0.1
CCNCP24863 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCNCP24863 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC15.7■□□□□ 0.1
CCNCP24863 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCNCP24863 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCNCP24863 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC15.7■□□□□ 0.1
CCNCP24863 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCNCP24863 AL645937.2-201ENST00000396808 931 ntBASIC15.7■□□□□ 0.1
CCNCP24863 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCNCP24863 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC15.7■□□□□ 0.1
CCNCP24863 GOLGA6L11P-201ENST00000417252 1298 ntBASIC15.7■□□□□ 0.1
CCNCP24863 AC098850.1-201ENST00000419919 790 ntBASIC15.7■□□□□ 0.1
CCNCP24863 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC15.7■□□□□ 0.1
CCNCP24863 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC15.7■□□□□ 0.1
CCNCP24863 CDK4-206ENST00000549606 558 ntTSL 2 BASIC15.7■□□□□ 0.1
CCNCP24863 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC15.7■□□□□ 0.1
CCNCP24863 AC120045.2-201ENST00000567334 178 ntBASIC15.7■□□□□ 0.1
CCNCP24863 NORAD-201ENST00000565493 5339 ntBASIC15.7■□□□□ 0.1
CCNCP24863 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCNCP24863 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC15.7■□□□□ 0.1
CCNCP24863 GSN-215ENST00000545652 2428 ntTSL 2 BASIC15.7■□□□□ 0.1
CCNCP24863 REXO1L2P-201ENST00000425429 2069 ntBASIC15.7■□□□□ 0.1
CCNCP24863 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CCNCP24863 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCNCP24863 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC15.7■□□□□ 0.1
CCNCP24863 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCNCP24863 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC15.7■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 68.1 ms