Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
ATF1P18846 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
ATF1P18846 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ATF1P18846 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ATF1P18846 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ATF1P18846 IMP4-203ENST00000409935 958 ntTSL 5 BASIC13.61□□□□□ -0.23
ATF1P18846 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC13.61□□□□□ -0.23
ATF1P18846 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
ATF1P18846 AC069335.1-201ENST00000489972 472 ntBASIC13.61□□□□□ -0.23
ATF1P18846 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC13.61□□□□□ -0.23
ATF1P18846 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC13.61□□□□□ -0.23
ATF1P18846 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
ATF1P18846 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
ATF1P18846 HNRNPUP1-201ENST00000554987 333 ntBASIC13.61□□□□□ -0.23
ATF1P18846 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
ATF1P18846 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC13.61□□□□□ -0.23
ATF1P18846 AC097359.3-201ENST00000603982 1210 ntBASIC13.61□□□□□ -0.23
ATF1P18846 AC084121.4-201ENST00000641598 221 ntBASIC13.61□□□□□ -0.23
ATF1P18846 AF228730.8-201ENST00000642140 221 ntBASIC13.61□□□□□ -0.23
ATF1P18846 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
ATF1P18846 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC13.61□□□□□ -0.23
ATF1P18846 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
ATF1P18846 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
ATF1P18846 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ATF1P18846 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ATF1P18846 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ATF1P18846 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC13.61□□□□□ -0.23
ATF1P18846 AC010327.5-201ENST00000586923 3061 ntBASIC13.61□□□□□ -0.23
ATF1P18846 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
ATF1P18846 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC13.61□□□□□ -0.23
ATF1P18846 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC13.61□□□□□ -0.23
ATF1P18846 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC13.61□□□□□ -0.23
ATF1P18846 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
ATF1P18846 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
ATF1P18846 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
ATF1P18846 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC13.61□□□□□ -0.23
ATF1P18846 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC13.61□□□□□ -0.23
ATF1P18846 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ATF1P18846 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC13.61□□□□□ -0.23
ATF1P18846 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
ATF1P18846 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ATF1P18846 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
ATF1P18846 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ATF1P18846 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ATF1P18846 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC13.6□□□□□ -0.23
ATF1P18846 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC13.6□□□□□ -0.23
ATF1P18846 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
ATF1P18846 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ATF1P18846 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ATF1P18846 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ATF1P18846 REXO1L2P-201ENST00000425429 2069 ntBASIC13.6□□□□□ -0.23
ATF1P18846 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC13.6□□□□□ -0.23
ATF1P18846 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
ATF1P18846 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ATF1P18846 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
ATF1P18846 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ATF1P18846 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
ATF1P18846 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
ATF1P18846 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
ATF1P18846 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ATF1P18846 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
ATF1P18846 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC13.6□□□□□ -0.23
ATF1P18846 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ATF1P18846 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
ATF1P18846 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
ATF1P18846 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC13.6□□□□□ -0.23
ATF1P18846 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
ATF1P18846 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
ATF1P18846 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
ATF1P18846 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ATF1P18846 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ATF1P18846 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
ATF1P18846 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
ATF1P18846 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ATF1P18846 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
ATF1P18846 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
ATF1P18846 AC004832.2-201ENST00000426397 482 ntBASIC13.6□□□□□ -0.23
ATF1P18846 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC13.6□□□□□ -0.23
ATF1P18846 MKNK2P1-201ENST00000437526 628 ntBASIC13.6□□□□□ -0.23
ATF1P18846 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC13.6□□□□□ -0.23
ATF1P18846 RARRES2P9-201ENST00000565168 469 ntBASIC13.6□□□□□ -0.23
ATF1P18846 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ATF1P18846 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ATF1P18846 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ATF1P18846 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
ATF1P18846 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ATF1P18846 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ATF1P18846 AC079781.5-202ENST00000641784 3743 ntBASIC13.6□□□□□ -0.23
ATF1P18846 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
ATF1P18846 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ATF1P18846 ARHGAP23P1-201ENST00000562773 1937 ntBASIC13.6□□□□□ -0.23
ATF1P18846 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ATF1P18846 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC13.6□□□□□ -0.23
ATF1P18846 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ATF1P18846 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
ATF1P18846 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
ATF1P18846 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
ATF1P18846 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
ATF1P18846 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC13.6□□□□□ -0.23
ATF1P18846 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 63.3 ms