Protein–RNA interactions for Protein: P17405

SMPD1, Sphingomyelin phosphodiesterase, humanhuman

Predictions only

Length 629 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1P17405 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC16.97■□□□□ 0.31
SMPD1P17405 AC005740.2-201ENST00000511085 419 ntBASIC16.97■□□□□ 0.31
SMPD1P17405 AC022217.1-201ENST00000521069 738 ntBASIC16.97■□□□□ 0.31
SMPD1P17405 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC16.97■□□□□ 0.31
SMPD1P17405 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC16.97■□□□□ 0.31
SMPD1P17405 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC16.97■□□□□ 0.31
SMPD1P17405 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC16.97■□□□□ 0.31
SMPD1P17405 COG4-212ENST00000564653 590 ntTSL 5 BASIC16.97■□□□□ 0.31
SMPD1P17405 RN7SL774P-201ENST00000577467 290 ntBASIC16.97■□□□□ 0.31
SMPD1P17405 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC16.97■□□□□ 0.31
SMPD1P17405 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SMPD1P17405 MIR4783-201ENST00000580343 82 ntBASIC16.97■□□□□ 0.31
SMPD1P17405 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SMPD1P17405 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC16.97■□□□□ 0.31
SMPD1P17405 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC16.97■□□□□ 0.31
SMPD1P17405 AL645939.5-201ENST00000606834 243 ntBASIC16.97■□□□□ 0.31
SMPD1P17405 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC16.97■□□□□ 0.31
SMPD1P17405 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC16.97■□□□□ 0.31
SMPD1P17405 AL023803.2-201ENST00000620080 638 ntBASIC16.97■□□□□ 0.31
SMPD1P17405 AC091812.3-201ENST00000621362 345 ntBASIC16.97■□□□□ 0.31
SMPD1P17405 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC16.97■□□□□ 0.31
SMPD1P17405 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
SMPD1P17405 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SMPD1P17405 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SMPD1P17405 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC16.97■□□□□ 0.31
SMPD1P17405 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SMPD1P17405 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
SMPD1P17405 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SMPD1P17405 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC16.97■□□□□ 0.31
SMPD1P17405 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SMPD1P17405 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SMPD1P17405 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SMPD1P17405 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC16.97■□□□□ 0.31
SMPD1P17405 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC16.97■□□□□ 0.31
SMPD1P17405 AC020916.1-201ENST00000587762 1774 ntBASIC16.97■□□□□ 0.31
SMPD1P17405 STK33-217ENST00000534493 1895 ntTSL 2 BASIC16.97■□□□□ 0.31
SMPD1P17405 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
SMPD1P17405 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SMPD1P17405 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SMPD1P17405 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SMPD1P17405 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SMPD1P17405 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SMPD1P17405 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SMPD1P17405 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SMPD1P17405 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC16.96■□□□□ 0.31
SMPD1P17405 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SMPD1P17405 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC16.96■□□□□ 0.31
SMPD1P17405 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SMPD1P17405 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SMPD1P17405 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SMPD1P17405 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SMPD1P17405 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC16.96■□□□□ 0.31
SMPD1P17405 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SMPD1P17405 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SMPD1P17405 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SMPD1P17405 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC16.96■□□□□ 0.31
SMPD1P17405 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC16.96■□□□□ 0.31
SMPD1P17405 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC16.96■□□□□ 0.31
SMPD1P17405 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
SMPD1P17405 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC16.96■□□□□ 0.31
SMPD1P17405 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC16.96■□□□□ 0.31
SMPD1P17405 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC16.96■□□□□ 0.31
SMPD1P17405 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SMPD1P17405 BNIP3P13-201ENST00000599968 566 ntBASIC16.96■□□□□ 0.31
SMPD1P17405 AL358472.3-201ENST00000608147 415 ntBASIC16.96■□□□□ 0.31
SMPD1P17405 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SMPD1P17405 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC16.96■□□□□ 0.31
SMPD1P17405 INE2-201ENST00000630399 1874 ntBASIC16.96■□□□□ 0.31
SMPD1P17405 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC16.96■□□□□ 0.31
SMPD1P17405 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SMPD1P17405 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
SMPD1P17405 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
SMPD1P17405 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC16.96■□□□□ 0.3
SMPD1P17405 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC16.96■□□□□ 0.3
SMPD1P17405 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.3
SMPD1P17405 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC16.96■□□□□ 0.3
SMPD1P17405 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
SMPD1P17405 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SMPD1P17405 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SMPD1P17405 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC16.95■□□□□ 0.3
SMPD1P17405 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC16.95■□□□□ 0.3
SMPD1P17405 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
SMPD1P17405 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
SMPD1P17405 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SMPD1P17405 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SMPD1P17405 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SMPD1P17405 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC16.95■□□□□ 0.3
SMPD1P17405 RN7SKP175-201ENST00000408472 289 ntBASIC16.95■□□□□ 0.3
SMPD1P17405 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC16.95■□□□□ 0.3
SMPD1P17405 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SMPD1P17405 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SMPD1P17405 AC245884.6-201ENST00000515672 1067 ntBASIC16.95■□□□□ 0.3
SMPD1P17405 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC16.95■□□□□ 0.3
SMPD1P17405 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC16.95■□□□□ 0.3
SMPD1P17405 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SMPD1P17405 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC16.95■□□□□ 0.3
SMPD1P17405 EID1-202ENST00000560490 584 ntTSL 3 BASIC16.95■□□□□ 0.3
SMPD1P17405 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC16.95■□□□□ 0.3
SMPD1P17405 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC16.95■□□□□ 0.3
SMPD1P17405 HCG18-245ENST00000602550 559 ntTSL 4 BASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 59.3 ms