Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
HLA-DOBP13765 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
HLA-DOBP13765 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC13.88□□□□□ -0.19
HLA-DOBP13765 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
HLA-DOBP13765 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
HLA-DOBP13765 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
HLA-DOBP13765 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC13.87□□□□□ -0.19
HLA-DOBP13765 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
HLA-DOBP13765 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC13.87□□□□□ -0.19
HLA-DOBP13765 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
HLA-DOBP13765 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
HLA-DOBP13765 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
HLA-DOBP13765 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC13.87□□□□□ -0.19
HLA-DOBP13765 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
HLA-DOBP13765 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC13.87□□□□□ -0.19
HLA-DOBP13765 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC13.87□□□□□ -0.19
HLA-DOBP13765 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
HLA-DOBP13765 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
HLA-DOBP13765 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
HLA-DOBP13765 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC13.87□□□□□ -0.19
HLA-DOBP13765 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
HLA-DOBP13765 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC13.87□□□□□ -0.19
HLA-DOBP13765 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC13.87□□□□□ -0.19
HLA-DOBP13765 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC13.87□□□□□ -0.19
HLA-DOBP13765 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC13.87□□□□□ -0.19
HLA-DOBP13765 FTH1-202ENST00000526640 786 ntTSL 2 BASIC13.87□□□□□ -0.19
HLA-DOBP13765 NAA60-208ENST00000570819 833 ntTSL 2 BASIC13.87□□□□□ -0.19
HLA-DOBP13765 RNA5-8SN1-201ENST00000610460 153 ntBASIC13.87□□□□□ -0.19
HLA-DOBP13765 RNA5-8SN5-202ENST00000612463 153 ntBASIC13.87□□□□□ -0.19
HLA-DOBP13765 RNA5-8SN4-201ENST00000613359 153 ntBASIC13.87□□□□□ -0.19
HLA-DOBP13765 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC13.87□□□□□ -0.19
HLA-DOBP13765 RNA5-8SN5-201ENST00000619471 153 ntBASIC13.87□□□□□ -0.19
HLA-DOBP13765 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC13.87□□□□□ -0.19
HLA-DOBP13765 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC13.87□□□□□ -0.19
HLA-DOBP13765 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
HLA-DOBP13765 AL359258.3-201ENST00000622910 2331 ntBASIC13.87□□□□□ -0.19
HLA-DOBP13765 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
HLA-DOBP13765 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC13.87□□□□□ -0.19
HLA-DOBP13765 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
HLA-DOBP13765 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
HLA-DOBP13765 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
HLA-DOBP13765 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
HLA-DOBP13765 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
HLA-DOBP13765 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
HLA-DOBP13765 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
HLA-DOBP13765 CLK3P2-201ENST00000427566 1453 ntBASIC13.87□□□□□ -0.19
HLA-DOBP13765 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
HLA-DOBP13765 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
HLA-DOBP13765 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC13.86□□□□□ -0.19
HLA-DOBP13765 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
HLA-DOBP13765 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
HLA-DOBP13765 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
HLA-DOBP13765 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
HLA-DOBP13765 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC13.86□□□□□ -0.19
HLA-DOBP13765 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
HLA-DOBP13765 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC13.86□□□□□ -0.19
HLA-DOBP13765 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
HLA-DOBP13765 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
HLA-DOBP13765 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
HLA-DOBP13765 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
HLA-DOBP13765 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC13.86□□□□□ -0.19
HLA-DOBP13765 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
HLA-DOBP13765 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
HLA-DOBP13765 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
HLA-DOBP13765 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
HLA-DOBP13765 PKIG-203ENST00000372887 769 ntTSL 3 BASIC13.86□□□□□ -0.19
HLA-DOBP13765 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
HLA-DOBP13765 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
HLA-DOBP13765 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
HLA-DOBP13765 PFN2-205ENST00000461868 613 ntTSL 2 BASIC13.86□□□□□ -0.19
HLA-DOBP13765 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC13.86□□□□□ -0.19
HLA-DOBP13765 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC13.86□□□□□ -0.19
HLA-DOBP13765 AL391069.4-201ENST00000609583 481 ntBASIC13.86□□□□□ -0.19
HLA-DOBP13765 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
HLA-DOBP13765 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
HLA-DOBP13765 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
HLA-DOBP13765 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
HLA-DOBP13765 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
HLA-DOBP13765 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
HLA-DOBP13765 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
HLA-DOBP13765 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
HLA-DOBP13765 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
HLA-DOBP13765 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC13.86□□□□□ -0.19
HLA-DOBP13765 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
HLA-DOBP13765 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
HLA-DOBP13765 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
HLA-DOBP13765 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC13.86□□□□□ -0.19
HLA-DOBP13765 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
HLA-DOBP13765 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
HLA-DOBP13765 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
HLA-DOBP13765 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC13.85□□□□□ -0.19
HLA-DOBP13765 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
HLA-DOBP13765 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
HLA-DOBP13765 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
HLA-DOBP13765 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
HLA-DOBP13765 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
HLA-DOBP13765 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC13.85□□□□□ -0.19
HLA-DOBP13765 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
HLA-DOBP13765 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
HLA-DOBP13765 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 57.4 ms