Protein–RNA interactions for Protein: P12838

DEFA4, Neutrophil defensin 4, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA4P12838 NPHP3-ACAD11-201ENST00000471702 7784 ntTSL 2 BASIC12.65□□□□□ -0.38
DEFA4P12838 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
DEFA4P12838 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
DEFA4P12838 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
DEFA4P12838 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
DEFA4P12838 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
DEFA4P12838 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC12.65□□□□□ -0.38
DEFA4P12838 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
DEFA4P12838 AC007292.2-201ENST00000593524 1812 ntBASIC12.65□□□□□ -0.38
DEFA4P12838 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
DEFA4P12838 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC12.65□□□□□ -0.38
DEFA4P12838 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
DEFA4P12838 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
DEFA4P12838 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
DEFA4P12838 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
DEFA4P12838 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
DEFA4P12838 AGAP7P-201ENST00000582299 2062 ntBASIC12.65□□□□□ -0.38
DEFA4P12838 AGAP14-201ENST00000624701 2060 ntBASIC12.65□□□□□ -0.38
DEFA4P12838 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
DEFA4P12838 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC12.65□□□□□ -0.38
DEFA4P12838 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
DEFA4P12838 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
DEFA4P12838 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
DEFA4P12838 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
DEFA4P12838 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
DEFA4P12838 ELL2P1-201ENST00000413990 1906 ntBASIC12.65□□□□□ -0.38
DEFA4P12838 AC005912.2-201ENST00000619492 2400 ntBASIC12.65□□□□□ -0.38
DEFA4P12838 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
DEFA4P12838 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
DEFA4P12838 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
DEFA4P12838 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC12.65□□□□□ -0.38
DEFA4P12838 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
DEFA4P12838 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC12.65□□□□□ -0.38
DEFA4P12838 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
DEFA4P12838 AC004987.2-201ENST00000395959 1148 ntBASIC12.65□□□□□ -0.38
DEFA4P12838 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
DEFA4P12838 AC142381.1-201ENST00000426099 345 ntBASIC12.65□□□□□ -0.38
DEFA4P12838 AL139010.1-201ENST00000454878 894 ntBASIC12.65□□□□□ -0.38
DEFA4P12838 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC12.65□□□□□ -0.38
DEFA4P12838 MAX-210ENST00000555419 765 ntTSL 5 BASIC12.65□□□□□ -0.38
DEFA4P12838 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC12.65□□□□□ -0.38
DEFA4P12838 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC12.65□□□□□ -0.38
DEFA4P12838 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC12.65□□□□□ -0.38
DEFA4P12838 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC12.65□□□□□ -0.38
DEFA4P12838 AC055717.3-201ENST00000622967 595 ntBASIC12.65□□□□□ -0.38
DEFA4P12838 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC12.65□□□□□ -0.38
DEFA4P12838 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
DEFA4P12838 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
DEFA4P12838 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
DEFA4P12838 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
DEFA4P12838 ZBTB45P2-201ENST00000452245 1531 ntBASIC12.65□□□□□ -0.38
DEFA4P12838 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
DEFA4P12838 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
DEFA4P12838 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
DEFA4P12838 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
DEFA4P12838 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC12.65□□□□□ -0.38
DEFA4P12838 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
DEFA4P12838 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC12.65□□□□□ -0.38
DEFA4P12838 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
DEFA4P12838 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
DEFA4P12838 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
DEFA4P12838 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
DEFA4P12838 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
DEFA4P12838 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC12.65□□□□□ -0.38
DEFA4P12838 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
DEFA4P12838 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC12.65□□□□□ -0.38
DEFA4P12838 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC12.65□□□□□ -0.38
DEFA4P12838 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
DEFA4P12838 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC12.65□□□□□ -0.39
DEFA4P12838 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC12.65□□□□□ -0.39
DEFA4P12838 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC12.64□□□□□ -0.39
DEFA4P12838 BANP-203ENST00000393207 2438 ntTSL 2 BASIC12.64□□□□□ -0.39
DEFA4P12838 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC12.64□□□□□ -0.39
DEFA4P12838 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
DEFA4P12838 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
DEFA4P12838 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
DEFA4P12838 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
DEFA4P12838 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
DEFA4P12838 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC12.64□□□□□ -0.39
DEFA4P12838 SAMD4A-202ENST00000392067 6833 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
DEFA4P12838 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
DEFA4P12838 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
DEFA4P12838 PARN-202ENST00000420015 2360 ntTSL 2 BASIC12.64□□□□□ -0.39
DEFA4P12838 AL691432.1-201ENST00000596308 1422 ntBASIC12.64□□□□□ -0.39
DEFA4P12838 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
DEFA4P12838 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC12.64□□□□□ -0.39
DEFA4P12838 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
DEFA4P12838 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
DEFA4P12838 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
DEFA4P12838 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
DEFA4P12838 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
DEFA4P12838 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC12.64□□□□□ -0.39
DEFA4P12838 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
DEFA4P12838 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
DEFA4P12838 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC12.64□□□□□ -0.39
DEFA4P12838 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
DEFA4P12838 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
DEFA4P12838 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC12.64□□□□□ -0.39
DEFA4P12838 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC12.64□□□□□ -0.39
DEFA4P12838 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC12.64□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms