Protein–RNA interactions for Protein: P12644

BMP4, Bone morphogenetic protein 4, humanhuman

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BMP4P12644 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
BMP4P12644 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
BMP4P12644 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
BMP4P12644 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
BMP4P12644 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
BMP4P12644 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
BMP4P12644 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
BMP4P12644 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
BMP4P12644 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
BMP4P12644 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
BMP4P12644 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC14.27□□□□□ -0.12
BMP4P12644 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
BMP4P12644 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
BMP4P12644 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
BMP4P12644 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
BMP4P12644 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
BMP4P12644 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC14.27□□□□□ -0.12
BMP4P12644 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC14.27□□□□□ -0.13
BMP4P12644 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
BMP4P12644 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC14.27□□□□□ -0.13
BMP4P12644 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
BMP4P12644 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC14.27□□□□□ -0.13
BMP4P12644 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC14.27□□□□□ -0.13
BMP4P12644 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
BMP4P12644 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC14.27□□□□□ -0.13
BMP4P12644 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC14.27□□□□□ -0.13
BMP4P12644 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC14.27□□□□□ -0.13
BMP4P12644 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC14.27□□□□□ -0.13
BMP4P12644 MIR4492-201ENST00000581627 80 ntBASIC14.27□□□□□ -0.13
BMP4P12644 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
BMP4P12644 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
BMP4P12644 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
BMP4P12644 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
BMP4P12644 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
BMP4P12644 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
BMP4P12644 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
BMP4P12644 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC14.27□□□□□ -0.13
BMP4P12644 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
BMP4P12644 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC14.27□□□□□ -0.13
BMP4P12644 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
BMP4P12644 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
BMP4P12644 RN7SL832P-201ENST00000607781 1756 ntBASIC14.27□□□□□ -0.13
BMP4P12644 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
BMP4P12644 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC14.27□□□□□ -0.13
BMP4P12644 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
BMP4P12644 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
BMP4P12644 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC14.26□□□□□ -0.13
BMP4P12644 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
BMP4P12644 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
BMP4P12644 AC126365.1-201ENST00000578585 1514 ntBASIC14.26□□□□□ -0.13
BMP4P12644 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
BMP4P12644 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC14.26□□□□□ -0.13
BMP4P12644 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
BMP4P12644 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
BMP4P12644 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
BMP4P12644 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
BMP4P12644 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC14.26□□□□□ -0.13
BMP4P12644 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
BMP4P12644 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
BMP4P12644 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC14.26□□□□□ -0.13
BMP4P12644 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
BMP4P12644 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
BMP4P12644 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
BMP4P12644 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
BMP4P12644 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
BMP4P12644 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
BMP4P12644 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC14.26□□□□□ -0.13
BMP4P12644 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC14.26□□□□□ -0.13
BMP4P12644 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC14.26□□□□□ -0.13
BMP4P12644 WDR53-204ENST00000433160 887 ntTSL 5 BASIC14.26□□□□□ -0.13
BMP4P12644 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
BMP4P12644 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC14.26□□□□□ -0.13
BMP4P12644 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
BMP4P12644 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
BMP4P12644 AL512356.2-201ENST00000546955 174 ntBASIC14.26□□□□□ -0.13
BMP4P12644 AC243562.1-201ENST00000560672 389 ntBASIC14.26□□□□□ -0.13
BMP4P12644 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
BMP4P12644 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC14.26□□□□□ -0.13
BMP4P12644 SIGLEC29P-201ENST00000599873 1114 ntBASIC14.26□□□□□ -0.13
BMP4P12644 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
BMP4P12644 AC008267.7-201ENST00000624570 1194 ntBASIC14.26□□□□□ -0.13
BMP4P12644 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
BMP4P12644 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
BMP4P12644 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
BMP4P12644 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC14.26□□□□□ -0.13
BMP4P12644 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
BMP4P12644 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
BMP4P12644 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC14.26□□□□□ -0.13
BMP4P12644 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
BMP4P12644 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC14.26□□□□□ -0.13
BMP4P12644 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
BMP4P12644 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC14.26□□□□□ -0.13
BMP4P12644 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
BMP4P12644 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
BMP4P12644 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
BMP4P12644 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
BMP4P12644 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
BMP4P12644 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
BMP4P12644 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
BMP4P12644 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms