Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 ZBED1P1-201ENST00000502364 1930 ntBASIC15.64■□□□□ 0.09
HLA-DQB2P05538 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
HLA-DQB2P05538 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
HLA-DQB2P05538 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
HLA-DQB2P05538 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
HLA-DQB2P05538 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
HLA-DQB2P05538 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
HLA-DQB2P05538 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
HLA-DQB2P05538 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC15.64■□□□□ 0.09
HLA-DQB2P05538 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
HLA-DQB2P05538 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
HLA-DQB2P05538 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
HLA-DQB2P05538 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
HLA-DQB2P05538 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HLA-DQB2P05538 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HLA-DQB2P05538 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HLA-DQB2P05538 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
HLA-DQB2P05538 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
HLA-DQB2P05538 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
HLA-DQB2P05538 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
HLA-DQB2P05538 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
HLA-DQB2P05538 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HLA-DQB2P05538 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
HLA-DQB2P05538 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
HLA-DQB2P05538 TPO-203ENST00000346956 2923 ntTSL 5 BASIC15.63■□□□□ 0.09
HLA-DQB2P05538 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
HLA-DQB2P05538 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
HLA-DQB2P05538 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HLA-DQB2P05538 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HLA-DQB2P05538 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HLA-DQB2P05538 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HLA-DQB2P05538 AC134915.1-201ENST00000426461 574 ntBASIC15.63■□□□□ 0.09
HLA-DQB2P05538 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC15.63■□□□□ 0.09
HLA-DQB2P05538 AC004066.1-201ENST00000502488 802 ntBASIC15.63■□□□□ 0.09
HLA-DQB2P05538 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC15.63■□□□□ 0.09
HLA-DQB2P05538 AL359711.2-201ENST00000563105 872 ntBASIC15.63■□□□□ 0.09
HLA-DQB2P05538 CTBP2P3-201ENST00000585629 1255 ntBASIC15.63■□□□□ 0.09
HLA-DQB2P05538 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
HLA-DQB2P05538 AC092364.2-202ENST00000597012 1073 ntBASIC15.63■□□□□ 0.09
HLA-DQB2P05538 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC15.63■□□□□ 0.09
HLA-DQB2P05538 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC15.63■□□□□ 0.09
HLA-DQB2P05538 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
HLA-DQB2P05538 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC15.63■□□□□ 0.09
HLA-DQB2P05538 SERF2-217ENST00000630046 862 ntTSL 5 BASIC15.63■□□□□ 0.09
HLA-DQB2P05538 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
HLA-DQB2P05538 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
HLA-DQB2P05538 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HLA-DQB2P05538 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HLA-DQB2P05538 AC012508.2-201ENST00000567613 1472 ntBASIC15.63■□□□□ 0.09
HLA-DQB2P05538 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
HLA-DQB2P05538 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC15.63■□□□□ 0.09
HLA-DQB2P05538 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HLA-DQB2P05538 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
HLA-DQB2P05538 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC15.63■□□□□ 0.09
HLA-DQB2P05538 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HLA-DQB2P05538 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
HLA-DQB2P05538 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HLA-DQB2P05538 AL138799.1-201ENST00000448213 1675 ntBASIC15.63■□□□□ 0.09
HLA-DQB2P05538 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC15.63■□□□□ 0.09
HLA-DQB2P05538 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
HLA-DQB2P05538 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HLA-DQB2P05538 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
HLA-DQB2P05538 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
HLA-DQB2P05538 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC15.63■□□□□ 0.09
HLA-DQB2P05538 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
HLA-DQB2P05538 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC15.63■□□□□ 0.09
HLA-DQB2P05538 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
HLA-DQB2P05538 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
HLA-DQB2P05538 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC15.63■□□□□ 0.09
HLA-DQB2P05538 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC15.63■□□□□ 0.09
HLA-DQB2P05538 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC15.62■□□□□ 0.09
HLA-DQB2P05538 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
HLA-DQB2P05538 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
HLA-DQB2P05538 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC15.62■□□□□ 0.09
HLA-DQB2P05538 AC007787.1-201ENST00000588095 1583 ntBASIC15.62■□□□□ 0.09
HLA-DQB2P05538 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
HLA-DQB2P05538 PCDHGB8P-201ENST00000502926 1973 ntBASIC15.62■□□□□ 0.09
HLA-DQB2P05538 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
HLA-DQB2P05538 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
HLA-DQB2P05538 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
HLA-DQB2P05538 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC15.62■□□□□ 0.09
HLA-DQB2P05538 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
HLA-DQB2P05538 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC15.62■□□□□ 0.09
HLA-DQB2P05538 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
HLA-DQB2P05538 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
HLA-DQB2P05538 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
HLA-DQB2P05538 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
HLA-DQB2P05538 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC15.62■□□□□ 0.09
HLA-DQB2P05538 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC15.62■□□□□ 0.09
HLA-DQB2P05538 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC15.62■□□□□ 0.09
HLA-DQB2P05538 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC15.62■□□□□ 0.09
HLA-DQB2P05538 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC15.62■□□□□ 0.09
HLA-DQB2P05538 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC15.62■□□□□ 0.09
HLA-DQB2P05538 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC15.62■□□□□ 0.09
HLA-DQB2P05538 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC15.62■□□□□ 0.09
HLA-DQB2P05538 TMEM261P1-201ENST00000604899 340 ntBASIC15.62■□□□□ 0.09
HLA-DQB2P05538 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC15.62■□□□□ 0.09
HLA-DQB2P05538 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
HLA-DQB2P05538 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC15.62■□□□□ 0.09
HLA-DQB2P05538 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms