Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 SCARNA21-201ENST00000517026 139 ntBASIC15.29■□□□□ 0.04
PDGFBP01127 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC15.29■□□□□ 0.04
PDGFBP01127 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
PDGFBP01127 DGAT2L7P-201ENST00000602462 744 ntBASIC15.29■□□□□ 0.04
PDGFBP01127 AC005632.3-201ENST00000605544 308 ntBASIC15.29■□□□□ 0.04
PDGFBP01127 AC073911.3-201ENST00000624401 631 ntBASIC15.29■□□□□ 0.04
PDGFBP01127 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PDGFBP01127 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC15.29■□□□□ 0.04
PDGFBP01127 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC15.29■□□□□ 0.04
PDGFBP01127 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PDGFBP01127 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PDGFBP01127 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PDGFBP01127 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
PDGFBP01127 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
PDGFBP01127 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC15.29■□□□□ 0.04
PDGFBP01127 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
PDGFBP01127 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PDGFBP01127 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
PDGFBP01127 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PDGFBP01127 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
PDGFBP01127 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
PDGFBP01127 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PDGFBP01127 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PDGFBP01127 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PDGFBP01127 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC15.28■□□□□ 0.04
PDGFBP01127 Z84468.1-201ENST00000626321 1408 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PDGFBP01127 PGR-209ENST00000617858 2816 ntTSL 5 BASIC15.28■□□□□ 0.04
PDGFBP01127 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC15.28■□□□□ 0.04
PDGFBP01127 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC15.28■□□□□ 0.04
PDGFBP01127 FAM90A7P-201ENST00000382628 1395 ntBASIC15.28■□□□□ 0.04
PDGFBP01127 FAM90A23P-201ENST00000400136 1395 ntBASIC15.28■□□□□ 0.04
PDGFBP01127 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC15.28■□□□□ 0.04
PDGFBP01127 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PDGFBP01127 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PDGFBP01127 PIGF-202ENST00000306465 1061 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PDGFBP01127 TTPAL-203ENST00000372906 1139 ntTSL 3 BASIC15.28■□□□□ 0.04
PDGFBP01127 AK6-201ENST00000380818 1183 ntTSL 2 BASIC15.28■□□□□ 0.04
PDGFBP01127 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
PDGFBP01127 AL356056.1-201ENST00000437899 369 ntTSL 5 BASIC15.28■□□□□ 0.04
PDGFBP01127 Metazoa_SRP.100-201ENST00000447610 282 ntBASIC15.28■□□□□ 0.04
PDGFBP01127 AC008723.1-201ENST00000506922 207 ntBASIC15.28■□□□□ 0.04
PDGFBP01127 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC15.28■□□□□ 0.04
PDGFBP01127 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC15.28■□□□□ 0.04
PDGFBP01127 FO393412.1-201ENST00000619841 382 ntBASIC15.28■□□□□ 0.04
PDGFBP01127 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PDGFBP01127 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PDGFBP01127 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PDGFBP01127 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PDGFBP01127 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PDGFBP01127 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
PDGFBP01127 AP001094.4-201ENST00000579008 2176 ntBASIC15.28■□□□□ 0.04
PDGFBP01127 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC15.28■□□□□ 0.04
PDGFBP01127 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PDGFBP01127 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PDGFBP01127 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PDGFBP01127 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
PDGFBP01127 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
PDGFBP01127 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC15.27■□□□□ 0.04
PDGFBP01127 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC15.27■□□□□ 0.04
PDGFBP01127 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PDGFBP01127 KRT8P21-201ENST00000430398 1491 ntBASIC15.27■□□□□ 0.04
PDGFBP01127 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
PDGFBP01127 MANEAL-201ENST00000329006 1930 ntTSL 2 BASIC15.27■□□□□ 0.04
PDGFBP01127 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC15.27■□□□□ 0.04
PDGFBP01127 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
PDGFBP01127 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PDGFBP01127 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
PDGFBP01127 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
PDGFBP01127 PCNA-202ENST00000379160 1359 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
PDGFBP01127 LINC02537-201ENST00000635943 1367 ntTSL 4 BASIC15.27■□□□□ 0.04
PDGFBP01127 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PDGFBP01127 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
PDGFBP01127 AC136759.1-202ENST00000530858 2194 ntBASIC15.27■□□□□ 0.04
PDGFBP01127 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
PDGFBP01127 TNNT2-204ENST00000367317 1050 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
PDGFBP01127 CTNNBIP1-201ENST00000377256 451 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
PDGFBP01127 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
PDGFBP01127 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC15.27■□□□□ 0.04
PDGFBP01127 TNNT2-209ENST00000421663 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
PDGFBP01127 POLR2H-203ENST00000430783 1159 ntTSL 2 BASIC15.27■□□□□ 0.04
PDGFBP01127 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
PDGFBP01127 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC15.27■□□□□ 0.04
PDGFBP01127 AC004869.1-201ENST00000440935 540 ntTSL 4 BASIC15.27■□□□□ 0.04
PDGFBP01127 CLNS1A-211ENST00000532069 898 ntTSL 3 BASIC15.27■□□□□ 0.04
PDGFBP01127 MRPL49-209ENST00000534078 518 ntTSL 2 BASIC15.27■□□□□ 0.04
PDGFBP01127 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
PDGFBP01127 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC15.27■□□□□ 0.04
PDGFBP01127 TPM1-223ENST00000560445 485 ntTSL 3 BASIC15.27■□□□□ 0.04
PDGFBP01127 INCA1-203ENST00000575780 1221 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
PDGFBP01127 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC15.27■□□□□ 0.04
PDGFBP01127 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
PDGFBP01127 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
PDGFBP01127 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC15.27■□□□□ 0.03
PDGFBP01127 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.03
PDGFBP01127 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.03
PDGFBP01127 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC15.27■□□□□ 0.03
PDGFBP01127 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.03
PDGFBP01127 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
PDGFBP01127 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
PDGFBP01127 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC15.27■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms