Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
ALDH1A1P00352 AC127024.7-201ENST00000625101 200 ntBASIC17.33■□□□□ 0.36
ALDH1A1P00352 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
ALDH1A1P00352 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.36
ALDH1A1P00352 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
ALDH1A1P00352 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
ALDH1A1P00352 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ALDH1A1P00352 MBLAC2-202ENST00000514906 1936 ntBASIC17.33■□□□□ 0.36
ALDH1A1P00352 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
ALDH1A1P00352 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
ALDH1A1P00352 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ALDH1A1P00352 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
ALDH1A1P00352 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC17.32■□□□□ 0.36
ALDH1A1P00352 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC17.32■□□□□ 0.36
ALDH1A1P00352 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
ALDH1A1P00352 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
ALDH1A1P00352 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ALDH1A1P00352 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC17.32■□□□□ 0.36
ALDH1A1P00352 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ALDH1A1P00352 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
ALDH1A1P00352 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ALDH1A1P00352 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ALDH1A1P00352 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC17.32■□□□□ 0.36
ALDH1A1P00352 LAIR2-201ENST00000301202 699 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
ALDH1A1P00352 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ALDH1A1P00352 HLA-K-203ENST00000430151 1046 ntBASIC17.32■□□□□ 0.36
ALDH1A1P00352 AC026434.2-201ENST00000506094 1078 ntBASIC17.32■□□□□ 0.36
ALDH1A1P00352 SCARNA21-201ENST00000517026 139 ntBASIC17.32■□□□□ 0.36
ALDH1A1P00352 RPS25-202ENST00000527673 835 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ALDH1A1P00352 AP003398.1-201ENST00000531124 318 ntBASIC17.32■□□□□ 0.36
ALDH1A1P00352 CLNS1A-211ENST00000532069 898 ntTSL 3 BASIC17.32■□□□□ 0.36
ALDH1A1P00352 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC17.32■□□□□ 0.36
ALDH1A1P00352 AL022344.2-201ENST00000568976 968 ntBASIC17.32■□□□□ 0.36
ALDH1A1P00352 UXT-AS1-202ENST00000591832 565 ntTSL 4 BASIC17.32■□□□□ 0.36
ALDH1A1P00352 UBA52-208ENST00000596304 554 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
ALDH1A1P00352 AL109837.1-201ENST00000603272 613 ntBASIC17.32■□□□□ 0.36
ALDH1A1P00352 LINC01783-202ENST00000614408 828 ntBASIC17.32■□□□□ 0.36
ALDH1A1P00352 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
ALDH1A1P00352 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
ALDH1A1P00352 BX284668.2-205ENST00000619677 828 ntBASIC17.32■□□□□ 0.36
ALDH1A1P00352 FO393412.1-201ENST00000619841 382 ntBASIC17.32■□□□□ 0.36
ALDH1A1P00352 RPL35-206ENST00000629845 340 ntTSL 5 BASIC17.32■□□□□ 0.36
ALDH1A1P00352 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
ALDH1A1P00352 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ALDH1A1P00352 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ALDH1A1P00352 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
ALDH1A1P00352 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
ALDH1A1P00352 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
ALDH1A1P00352 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
ALDH1A1P00352 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
ALDH1A1P00352 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC17.32■□□□□ 0.36
ALDH1A1P00352 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
ALDH1A1P00352 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
ALDH1A1P00352 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ALDH1A1P00352 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC17.32■□□□□ 0.36
ALDH1A1P00352 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ALDH1A1P00352 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC17.31■□□□□ 0.36
ALDH1A1P00352 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ALDH1A1P00352 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
ALDH1A1P00352 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ALDH1A1P00352 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ALDH1A1P00352 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC17.31■□□□□ 0.36
ALDH1A1P00352 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
ALDH1A1P00352 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
ALDH1A1P00352 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ALDH1A1P00352 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
ALDH1A1P00352 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
ALDH1A1P00352 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
ALDH1A1P00352 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC17.31■□□□□ 0.36
ALDH1A1P00352 FRMPD2B-201ENST00000431305 1347 ntBASIC17.31■□□□□ 0.36
ALDH1A1P00352 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ALDH1A1P00352 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC17.31■□□□□ 0.36
ALDH1A1P00352 IDS-203ENST00000428056 1213 ntTSL 2 BASIC17.31■□□□□ 0.36
ALDH1A1P00352 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC17.31■□□□□ 0.36
ALDH1A1P00352 MIR503HG-202ENST00000440570 760 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
ALDH1A1P00352 Metazoa_SRP.100-201ENST00000447610 282 ntBASIC17.31■□□□□ 0.36
ALDH1A1P00352 AC108199.1-201ENST00000504249 508 ntTSL 3 BASIC17.31■□□□□ 0.36
ALDH1A1P00352 AC138696.2-201ENST00000607376 223 ntBASIC17.31■□□□□ 0.36
ALDH1A1P00352 PRSS45-202ENST00000620911 1041 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
ALDH1A1P00352 AC138466.4-201ENST00000623965 852 ntBASIC17.31■□□□□ 0.36
ALDH1A1P00352 AC244394.1-201ENST00000435000 1665 ntBASIC17.31■□□□□ 0.36
ALDH1A1P00352 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC17.31■□□□□ 0.36
ALDH1A1P00352 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC17.31■□□□□ 0.36
ALDH1A1P00352 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
ALDH1A1P00352 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC17.31■□□□□ 0.36
ALDH1A1P00352 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
ALDH1A1P00352 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
ALDH1A1P00352 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ALDH1A1P00352 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
ALDH1A1P00352 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
ALDH1A1P00352 STK26-204ENST00000481105 1835 ntTSL 2 BASIC17.31■□□□□ 0.36
ALDH1A1P00352 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
ALDH1A1P00352 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
ALDH1A1P00352 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC17.3■□□□□ 0.36
ALDH1A1P00352 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC17.3■□□□□ 0.36
ALDH1A1P00352 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
ALDH1A1P00352 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC17.3■□□□□ 0.36
ALDH1A1P00352 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC17.3■□□□□ 0.36
ALDH1A1P00352 MIR22HG-201ENST00000334146 1383 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
ALDH1A1P00352 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms