Protein–RNA interactions for Protein: O60813

PRAMEF11, PRAME family member 11, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF11O60813 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
PRAMEF11O60813 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
PRAMEF11O60813 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
PRAMEF11O60813 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC15.6■□□□□ 0.09
PRAMEF11O60813 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC15.6■□□□□ 0.09
PRAMEF11O60813 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
PRAMEF11O60813 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PRAMEF11O60813 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC15.6■□□□□ 0.09
PRAMEF11O60813 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
PRAMEF11O60813 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
PRAMEF11O60813 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PRAMEF11O60813 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
PRAMEF11O60813 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
PRAMEF11O60813 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
PRAMEF11O60813 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
PRAMEF11O60813 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC15.6■□□□□ 0.09
PRAMEF11O60813 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC15.6■□□□□ 0.09
PRAMEF11O60813 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC15.6■□□□□ 0.09
PRAMEF11O60813 AL139094.1-201ENST00000405549 1188 ntBASIC15.6■□□□□ 0.09
PRAMEF11O60813 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC15.6■□□□□ 0.09
PRAMEF11O60813 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC15.6■□□□□ 0.09
PRAMEF11O60813 HLA-K-203ENST00000430151 1046 ntBASIC15.6■□□□□ 0.09
PRAMEF11O60813 GSAP-205ENST00000430584 600 ntTSL 5 BASIC15.6■□□□□ 0.09
PRAMEF11O60813 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC15.6■□□□□ 0.09
PRAMEF11O60813 AC114812.1-204ENST00000449669 728 ntBASIC15.6■□□□□ 0.09
PRAMEF11O60813 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC15.6■□□□□ 0.09
PRAMEF11O60813 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
PRAMEF11O60813 AC022137.2-201ENST00000503482 481 ntBASIC15.6■□□□□ 0.09
PRAMEF11O60813 FUZ-207ENST00000526575 482 ntTSL 4 BASIC15.6■□□□□ 0.09
PRAMEF11O60813 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC15.6■□□□□ 0.09
PRAMEF11O60813 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC15.6■□□□□ 0.09
PRAMEF11O60813 KSR1-207ENST00000578981 748 ntTSL 4 BASIC15.6■□□□□ 0.09
PRAMEF11O60813 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC15.6■□□□□ 0.09
PRAMEF11O60813 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC15.6■□□□□ 0.09
PRAMEF11O60813 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
PRAMEF11O60813 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
PRAMEF11O60813 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
PRAMEF11O60813 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PRAMEF11O60813 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
PRAMEF11O60813 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC15.6■□□□□ 0.09
PRAMEF11O60813 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
PRAMEF11O60813 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
PRAMEF11O60813 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
PRAMEF11O60813 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PRAMEF11O60813 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PRAMEF11O60813 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC15.6■□□□□ 0.09
PRAMEF11O60813 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
PRAMEF11O60813 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PRAMEF11O60813 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC15.6■□□□□ 0.09
PRAMEF11O60813 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PRAMEF11O60813 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC15.6■□□□□ 0.09
PRAMEF11O60813 AL359258.3-201ENST00000622910 2331 ntBASIC15.6■□□□□ 0.09
PRAMEF11O60813 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PRAMEF11O60813 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PRAMEF11O60813 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PRAMEF11O60813 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC15.6■□□□□ 0.09
PRAMEF11O60813 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
PRAMEF11O60813 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
PRAMEF11O60813 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC15.6■□□□□ 0.09
PRAMEF11O60813 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
PRAMEF11O60813 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
PRAMEF11O60813 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC15.59■□□□□ 0.09
PRAMEF11O60813 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
PRAMEF11O60813 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
PRAMEF11O60813 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
PRAMEF11O60813 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
PRAMEF11O60813 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC15.59■□□□□ 0.09
PRAMEF11O60813 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PRAMEF11O60813 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
PRAMEF11O60813 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
PRAMEF11O60813 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC15.59■□□□□ 0.09
PRAMEF11O60813 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
PRAMEF11O60813 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC15.59■□□□□ 0.09
PRAMEF11O60813 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC15.59■□□□□ 0.09
PRAMEF11O60813 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
PRAMEF11O60813 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
PRAMEF11O60813 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC15.59■□□□□ 0.09
PRAMEF11O60813 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PRAMEF11O60813 PGGT1BP2-201ENST00000398621 1028 ntBASIC15.59■□□□□ 0.09
PRAMEF11O60813 KLF2P2-201ENST00000416807 1039 ntBASIC15.59■□□□□ 0.09
PRAMEF11O60813 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC15.59■□□□□ 0.09
PRAMEF11O60813 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC15.59■□□□□ 0.09
PRAMEF11O60813 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC15.59■□□□□ 0.09
PRAMEF11O60813 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC15.59■□□□□ 0.09
PRAMEF11O60813 GAPDHP21-201ENST00000450301 1010 ntBASIC15.59■□□□□ 0.09
PRAMEF11O60813 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC15.59■□□□□ 0.09
PRAMEF11O60813 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
PRAMEF11O60813 TDH-203ENST00000531764 1110 ntBASIC15.59■□□□□ 0.09
PRAMEF11O60813 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
PRAMEF11O60813 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PRAMEF11O60813 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
PRAMEF11O60813 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
PRAMEF11O60813 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
PRAMEF11O60813 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
PRAMEF11O60813 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
PRAMEF11O60813 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC15.59■□□□□ 0.09
PRAMEF11O60813 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC15.59■□□□□ 0.09
PRAMEF11O60813 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PRAMEF11O60813 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PRAMEF11O60813 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC15.59■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 88.8 ms