Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
LDB2O43679 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC15.42■□□□□ 0.06
LDB2O43679 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
LDB2O43679 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC15.42■□□□□ 0.06
LDB2O43679 DFFBP1-201ENST00000433250 979 ntBASIC15.42■□□□□ 0.06
LDB2O43679 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
LDB2O43679 VDAC1P7-201ENST00000462417 847 ntBASIC15.42■□□□□ 0.06
LDB2O43679 OARD1-208ENST00000469104 704 ntTSL 2 BASIC15.42■□□□□ 0.06
LDB2O43679 TERF1P3-201ENST00000505638 1227 ntBASIC15.42■□□□□ 0.06
LDB2O43679 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC15.42■□□□□ 0.06
LDB2O43679 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC15.42■□□□□ 0.06
LDB2O43679 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
LDB2O43679 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC15.42■□□□□ 0.06
LDB2O43679 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC15.42■□□□□ 0.06
LDB2O43679 AC107373.2-201ENST00000607735 490 ntBASIC15.42■□□□□ 0.06
LDB2O43679 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
LDB2O43679 AC008761.3-201ENST00000624803 892 ntBASIC15.42■□□□□ 0.06
LDB2O43679 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC15.42■□□□□ 0.06
LDB2O43679 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC15.42■□□□□ 0.06
LDB2O43679 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC15.42■□□□□ 0.06
LDB2O43679 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
LDB2O43679 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC15.42■□□□□ 0.06
LDB2O43679 AMT-232ENST00000636199 1546 ntTSL 5 BASIC15.42■□□□□ 0.06
LDB2O43679 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
LDB2O43679 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
LDB2O43679 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC15.42■□□□□ 0.06
LDB2O43679 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
LDB2O43679 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC15.41■□□□□ 0.06
LDB2O43679 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC15.41■□□□□ 0.06
LDB2O43679 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
LDB2O43679 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
LDB2O43679 AJ011931.1-201ENST00000618749 2492 ntBASIC15.41■□□□□ 0.06
LDB2O43679 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
LDB2O43679 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
LDB2O43679 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
LDB2O43679 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
LDB2O43679 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
LDB2O43679 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LDB2O43679 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LDB2O43679 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LDB2O43679 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC15.41■□□□□ 0.06
LDB2O43679 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
LDB2O43679 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC15.41■□□□□ 0.06
LDB2O43679 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LDB2O43679 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
LDB2O43679 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LDB2O43679 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
LDB2O43679 AC098850.1-201ENST00000419919 790 ntBASIC15.41■□□□□ 0.06
LDB2O43679 AC002472.2-201ENST00000442739 958 ntBASIC15.41■□□□□ 0.06
LDB2O43679 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
LDB2O43679 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC15.41■□□□□ 0.06
LDB2O43679 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC15.41■□□□□ 0.06
LDB2O43679 AL132655.2-201ENST00000596276 594 ntBASIC15.41■□□□□ 0.06
LDB2O43679 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
LDB2O43679 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC15.41■□□□□ 0.06
LDB2O43679 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
LDB2O43679 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LDB2O43679 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LDB2O43679 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC15.41■□□□□ 0.06
LDB2O43679 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
LDB2O43679 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC15.41■□□□□ 0.06
LDB2O43679 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC15.41■□□□□ 0.06
LDB2O43679 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LDB2O43679 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC15.41■□□□□ 0.06
LDB2O43679 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LDB2O43679 CICP24-201ENST00000605464 2705 ntBASIC15.41■□□□□ 0.06
LDB2O43679 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
LDB2O43679 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
LDB2O43679 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC15.41■□□□□ 0.06
LDB2O43679 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
LDB2O43679 AC007787.1-201ENST00000588095 1583 ntBASIC15.41■□□□□ 0.06
LDB2O43679 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LDB2O43679 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
LDB2O43679 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
LDB2O43679 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LDB2O43679 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LDB2O43679 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
LDB2O43679 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
LDB2O43679 AC007541.1-201ENST00000570282 1469 ntBASIC15.4■□□□□ 0.06
LDB2O43679 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
LDB2O43679 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC15.4■□□□□ 0.06
LDB2O43679 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC15.4■□□□□ 0.06
LDB2O43679 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC15.4■□□□□ 0.06
LDB2O43679 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LDB2O43679 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
LDB2O43679 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LDB2O43679 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
LDB2O43679 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
LDB2O43679 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
LDB2O43679 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LDB2O43679 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC15.4■□□□□ 0.06
LDB2O43679 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
LDB2O43679 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LDB2O43679 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LDB2O43679 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
LDB2O43679 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC15.4■□□□□ 0.06
LDB2O43679 METTL26-204ENST00000397665 558 ntTSL 2 BASIC15.4■□□□□ 0.06
LDB2O43679 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC15.4■□□□□ 0.06
LDB2O43679 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
LDB2O43679 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC15.4■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms