Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 PFAS-212ENST00000625942 396 ntTSL 5 BASIC14.11□□□□□ -0.15
NPIPA2E9PIF3 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NPIPA2E9PIF3 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
NPIPA2E9PIF3 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
NPIPA2E9PIF3 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NPIPA2E9PIF3 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC14.11□□□□□ -0.15
NPIPA2E9PIF3 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NPIPA2E9PIF3 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
NPIPA2E9PIF3 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC14.11□□□□□ -0.15
NPIPA2E9PIF3 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
NPIPA2E9PIF3 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
NPIPA2E9PIF3 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
NPIPA2E9PIF3 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
NPIPA2E9PIF3 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC14.11□□□□□ -0.15
NPIPA2E9PIF3 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
NPIPA2E9PIF3 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NPIPA2E9PIF3 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NPIPA2E9PIF3 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NPIPA2E9PIF3 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
NPIPA2E9PIF3 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
NPIPA2E9PIF3 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
NPIPA2E9PIF3 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
NPIPA2E9PIF3 HNRNPA1P48-201ENST00000562726 1377 ntBASIC14.1□□□□□ -0.15
NPIPA2E9PIF3 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC14.1□□□□□ -0.15
NPIPA2E9PIF3 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC14.1□□□□□ -0.15
NPIPA2E9PIF3 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
NPIPA2E9PIF3 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC14.1□□□□□ -0.15
NPIPA2E9PIF3 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
NPIPA2E9PIF3 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
NPIPA2E9PIF3 ABR-203ENST00000536794 2213 ntTSL 2 BASIC14.1□□□□□ -0.15
NPIPA2E9PIF3 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
NPIPA2E9PIF3 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC14.1□□□□□ -0.15
NPIPA2E9PIF3 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
NPIPA2E9PIF3 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
NPIPA2E9PIF3 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
NPIPA2E9PIF3 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
NPIPA2E9PIF3 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC14.1□□□□□ -0.15
NPIPA2E9PIF3 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
NPIPA2E9PIF3 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
NPIPA2E9PIF3 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
NPIPA2E9PIF3 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
NPIPA2E9PIF3 BOLA2P3-201ENST00000404566 256 ntBASIC14.1□□□□□ -0.15
NPIPA2E9PIF3 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
NPIPA2E9PIF3 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
NPIPA2E9PIF3 ACTG1P3-201ENST00000431775 1114 ntBASIC14.1□□□□□ -0.15
NPIPA2E9PIF3 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC14.1□□□□□ -0.15
NPIPA2E9PIF3 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC14.1□□□□□ -0.15
NPIPA2E9PIF3 KRT223P-202ENST00000449164 1292 ntBASIC14.1□□□□□ -0.15
NPIPA2E9PIF3 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC14.1□□□□□ -0.15
NPIPA2E9PIF3 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC14.1□□□□□ -0.15
NPIPA2E9PIF3 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC14.1□□□□□ -0.15
NPIPA2E9PIF3 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC14.1□□□□□ -0.15
NPIPA2E9PIF3 USP32P1-208ENST00000506594 1164 ntBASIC14.1□□□□□ -0.15
NPIPA2E9PIF3 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
NPIPA2E9PIF3 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
NPIPA2E9PIF3 AP005482.1-201ENST00000563722 1273 ntBASIC14.1□□□□□ -0.15
NPIPA2E9PIF3 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC14.1□□□□□ -0.15
NPIPA2E9PIF3 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC14.1□□□□□ -0.15
NPIPA2E9PIF3 MIR4259-201ENST00000584466 101 ntBASIC14.1□□□□□ -0.15
NPIPA2E9PIF3 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC14.1□□□□□ -0.15
NPIPA2E9PIF3 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC14.1□□□□□ -0.15
NPIPA2E9PIF3 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC14.1□□□□□ -0.15
NPIPA2E9PIF3 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC14.1□□□□□ -0.15
NPIPA2E9PIF3 RPSAP52-203ENST00000622976 1023 ntBASIC14.1□□□□□ -0.15
NPIPA2E9PIF3 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC14.1□□□□□ -0.15
NPIPA2E9PIF3 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
NPIPA2E9PIF3 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
NPIPA2E9PIF3 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC14.1□□□□□ -0.15
NPIPA2E9PIF3 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC14.1□□□□□ -0.15
NPIPA2E9PIF3 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
NPIPA2E9PIF3 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
NPIPA2E9PIF3 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
NPIPA2E9PIF3 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC14.1□□□□□ -0.15
NPIPA2E9PIF3 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
NPIPA2E9PIF3 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
NPIPA2E9PIF3 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
NPIPA2E9PIF3 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
NPIPA2E9PIF3 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
NPIPA2E9PIF3 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC14.1□□□□□ -0.15
NPIPA2E9PIF3 AL121723.1-201ENST00000445194 1519 ntBASIC14.1□□□□□ -0.15
NPIPA2E9PIF3 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC14.1□□□□□ -0.15
NPIPA2E9PIF3 TKT-202ENST00000423516 2075 ntTSL 2 BASIC14.1□□□□□ -0.15
NPIPA2E9PIF3 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
NPIPA2E9PIF3 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
NPIPA2E9PIF3 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
NPIPA2E9PIF3 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC14.1□□□□□ -0.15
NPIPA2E9PIF3 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
NPIPA2E9PIF3 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC14.1□□□□□ -0.15
NPIPA2E9PIF3 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
NPIPA2E9PIF3 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
NPIPA2E9PIF3 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC14.09□□□□□ -0.15
NPIPA2E9PIF3 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC14.09□□□□□ -0.15
NPIPA2E9PIF3 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
NPIPA2E9PIF3 FUK-207ENST00000571514 3054 ntTSL 2 BASIC14.09□□□□□ -0.15
NPIPA2E9PIF3 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC14.09□□□□□ -0.15
NPIPA2E9PIF3 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
NPIPA2E9PIF3 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC14.09□□□□□ -0.15
NPIPA2E9PIF3 HLA-DQB2-231ENST00000435145 2026 ntBASIC14.09□□□□□ -0.15
NPIPA2E9PIF3 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
NPIPA2E9PIF3 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms