Protein–RNA interactions for Protein: A6NEW6

FAM90A16P, Putative protein FAM90A16P/FAM90A17P, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM90A16PA6NEW6 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
FAM90A16PA6NEW6 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC13.01□□□□□ -0.33
FAM90A16PA6NEW6 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
FAM90A16PA6NEW6 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC13.01□□□□□ -0.33
FAM90A16PA6NEW6 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC13.01□□□□□ -0.33
FAM90A16PA6NEW6 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
FAM90A16PA6NEW6 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
FAM90A16PA6NEW6 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC13.01□□□□□ -0.33
FAM90A16PA6NEW6 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC13.01□□□□□ -0.33
FAM90A16PA6NEW6 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
FAM90A16PA6NEW6 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
FAM90A16PA6NEW6 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
FAM90A16PA6NEW6 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
FAM90A16PA6NEW6 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
FAM90A16PA6NEW6 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
FAM90A16PA6NEW6 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
FAM90A16PA6NEW6 RPL37AP1-201ENST00000412502 279 ntBASIC13.01□□□□□ -0.33
FAM90A16PA6NEW6 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC13.01□□□□□ -0.33
FAM90A16PA6NEW6 KRT18P64-201ENST00000434946 1219 ntBASIC13.01□□□□□ -0.33
FAM90A16PA6NEW6 METTL21AP1-201ENST00000438852 635 ntBASIC13.01□□□□□ -0.33
FAM90A16PA6NEW6 RN7SL618P-201ENST00000477850 296 ntBASIC13.01□□□□□ -0.33
FAM90A16PA6NEW6 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
FAM90A16PA6NEW6 SLBP-205ENST00000488267 987 ntTSL 2 BASIC13.01□□□□□ -0.33
FAM90A16PA6NEW6 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC13.01□□□□□ -0.33
FAM90A16PA6NEW6 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC13.01□□□□□ -0.33
FAM90A16PA6NEW6 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
FAM90A16PA6NEW6 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
FAM90A16PA6NEW6 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC13.01□□□□□ -0.33
FAM90A16PA6NEW6 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC13.01□□□□□ -0.33
FAM90A16PA6NEW6 AC000095.1-201ENST00000603208 874 ntBASIC13.01□□□□□ -0.33
FAM90A16PA6NEW6 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC13.01□□□□□ -0.33
FAM90A16PA6NEW6 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC13.01□□□□□ -0.33
FAM90A16PA6NEW6 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC13.01□□□□□ -0.33
FAM90A16PA6NEW6 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
FAM90A16PA6NEW6 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
FAM90A16PA6NEW6 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
FAM90A16PA6NEW6 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
FAM90A16PA6NEW6 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC13.01□□□□□ -0.33
FAM90A16PA6NEW6 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
FAM90A16PA6NEW6 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
FAM90A16PA6NEW6 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
FAM90A16PA6NEW6 GRK6P1-201ENST00000400595 1711 ntBASIC13.01□□□□□ -0.33
FAM90A16PA6NEW6 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
FAM90A16PA6NEW6 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC13.01□□□□□ -0.33
FAM90A16PA6NEW6 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
FAM90A16PA6NEW6 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
FAM90A16PA6NEW6 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
FAM90A16PA6NEW6 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
FAM90A16PA6NEW6 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
FAM90A16PA6NEW6 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
FAM90A16PA6NEW6 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
FAM90A16PA6NEW6 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
FAM90A16PA6NEW6 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
FAM90A16PA6NEW6 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
FAM90A16PA6NEW6 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
FAM90A16PA6NEW6 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC13□□□□□ -0.33
FAM90A16PA6NEW6 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
FAM90A16PA6NEW6 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
FAM90A16PA6NEW6 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
FAM90A16PA6NEW6 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
FAM90A16PA6NEW6 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC13□□□□□ -0.33
FAM90A16PA6NEW6 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
FAM90A16PA6NEW6 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC13□□□□□ -0.33
FAM90A16PA6NEW6 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC13□□□□□ -0.33
FAM90A16PA6NEW6 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
FAM90A16PA6NEW6 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
FAM90A16PA6NEW6 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
FAM90A16PA6NEW6 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC13□□□□□ -0.33
FAM90A16PA6NEW6 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC13□□□□□ -0.33
FAM90A16PA6NEW6 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC13□□□□□ -0.33
FAM90A16PA6NEW6 AL161772.1-201ENST00000610494 4412 ntBASIC13□□□□□ -0.33
FAM90A16PA6NEW6 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
FAM90A16PA6NEW6 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC13□□□□□ -0.33
FAM90A16PA6NEW6 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
FAM90A16PA6NEW6 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC13□□□□□ -0.33
FAM90A16PA6NEW6 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
FAM90A16PA6NEW6 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC13□□□□□ -0.33
FAM90A16PA6NEW6 HNRNPFP1-201ENST00000391730 1133 ntBASIC13□□□□□ -0.33
FAM90A16PA6NEW6 GGCT-205ENST00000409436 954 ntTSL 3 BASIC13□□□□□ -0.33
FAM90A16PA6NEW6 PON3-203ENST00000427422 894 ntTSL 3 BASIC13□□□□□ -0.33
FAM90A16PA6NEW6 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
FAM90A16PA6NEW6 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC13□□□□□ -0.33
FAM90A16PA6NEW6 VPS29-207ENST00000549970 818 ntTSL 3 BASIC13□□□□□ -0.33
FAM90A16PA6NEW6 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC13□□□□□ -0.33
FAM90A16PA6NEW6 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC13□□□□□ -0.33
FAM90A16PA6NEW6 LSM12-202ENST00000585388 942 ntTSL 3 BASIC13□□□□□ -0.33
FAM90A16PA6NEW6 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC13□□□□□ -0.33
FAM90A16PA6NEW6 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC13□□□□□ -0.33
FAM90A16PA6NEW6 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
FAM90A16PA6NEW6 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC13□□□□□ -0.33
FAM90A16PA6NEW6 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
FAM90A16PA6NEW6 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
FAM90A16PA6NEW6 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
FAM90A16PA6NEW6 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
FAM90A16PA6NEW6 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
FAM90A16PA6NEW6 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC13□□□□□ -0.33
FAM90A16PA6NEW6 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
FAM90A16PA6NEW6 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
FAM90A16PA6NEW6 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC13□□□□□ -0.33
FAM90A16PA6NEW6 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms