Protein–RNA interactions for Protein: A6NE82

MBD3L3, Putative methyl-CpG-binding domain protein 3-like 3, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L3A6NE82 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC13.45□□□□□ -0.26
MBD3L3A6NE82 AC244157.2-201ENST00000616239 1006 ntBASIC13.45□□□□□ -0.26
MBD3L3A6NE82 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
MBD3L3A6NE82 AC138466.3-201ENST00000619983 221 ntBASIC13.45□□□□□ -0.26
MBD3L3A6NE82 AL008638.5-201ENST00000623814 1298 ntBASIC13.45□□□□□ -0.26
MBD3L3A6NE82 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
MBD3L3A6NE82 CICP11-201ENST00000434745 2827 ntBASIC13.45□□□□□ -0.26
MBD3L3A6NE82 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC13.45□□□□□ -0.26
MBD3L3A6NE82 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
MBD3L3A6NE82 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC13.45□□□□□ -0.26
MBD3L3A6NE82 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
MBD3L3A6NE82 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
MBD3L3A6NE82 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
MBD3L3A6NE82 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
MBD3L3A6NE82 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
MBD3L3A6NE82 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
MBD3L3A6NE82 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
MBD3L3A6NE82 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
MBD3L3A6NE82 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
MBD3L3A6NE82 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
MBD3L3A6NE82 REXO1L4P-201ENST00000605109 1937 ntBASIC13.45□□□□□ -0.26
MBD3L3A6NE82 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
MBD3L3A6NE82 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC13.44□□□□□ -0.26
MBD3L3A6NE82 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
MBD3L3A6NE82 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC13.44□□□□□ -0.26
MBD3L3A6NE82 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC13.44□□□□□ -0.26
MBD3L3A6NE82 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
MBD3L3A6NE82 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
MBD3L3A6NE82 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
MBD3L3A6NE82 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
MBD3L3A6NE82 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
MBD3L3A6NE82 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
MBD3L3A6NE82 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC13.44□□□□□ -0.26
MBD3L3A6NE82 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
MBD3L3A6NE82 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC13.44□□□□□ -0.26
MBD3L3A6NE82 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC13.44□□□□□ -0.26
MBD3L3A6NE82 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC13.44□□□□□ -0.26
MBD3L3A6NE82 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
MBD3L3A6NE82 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC13.44□□□□□ -0.26
MBD3L3A6NE82 HSPB1P2-201ENST00000448722 546 ntBASIC13.44□□□□□ -0.26
MBD3L3A6NE82 AC104306.2-201ENST00000451877 341 ntBASIC13.44□□□□□ -0.26
MBD3L3A6NE82 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
MBD3L3A6NE82 AL391280.1-201ENST00000506969 1062 ntBASIC13.44□□□□□ -0.26
MBD3L3A6NE82 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC13.44□□□□□ -0.26
MBD3L3A6NE82 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC13.44□□□□□ -0.26
MBD3L3A6NE82 NCK2-206ENST00000522586 490 ntTSL 5 BASIC13.44□□□□□ -0.26
MBD3L3A6NE82 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC13.44□□□□□ -0.26
MBD3L3A6NE82 PPY2P-201ENST00000582808 702 ntBASIC13.44□□□□□ -0.26
MBD3L3A6NE82 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
MBD3L3A6NE82 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC13.44□□□□□ -0.26
MBD3L3A6NE82 AC073413.1-201ENST00000603927 732 ntBASIC13.44□□□□□ -0.26
MBD3L3A6NE82 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC13.44□□□□□ -0.26
MBD3L3A6NE82 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
MBD3L3A6NE82 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
MBD3L3A6NE82 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
MBD3L3A6NE82 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
MBD3L3A6NE82 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
MBD3L3A6NE82 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
MBD3L3A6NE82 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
MBD3L3A6NE82 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
MBD3L3A6NE82 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC13.44□□□□□ -0.26
MBD3L3A6NE82 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
MBD3L3A6NE82 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
MBD3L3A6NE82 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
MBD3L3A6NE82 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
MBD3L3A6NE82 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
MBD3L3A6NE82 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
MBD3L3A6NE82 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
MBD3L3A6NE82 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
MBD3L3A6NE82 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC13.43□□□□□ -0.26
MBD3L3A6NE82 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
MBD3L3A6NE82 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC13.43□□□□□ -0.26
MBD3L3A6NE82 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
MBD3L3A6NE82 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC13.43□□□□□ -0.26
MBD3L3A6NE82 CLUHP2-201ENST00000426660 1303 ntBASIC13.43□□□□□ -0.26
MBD3L3A6NE82 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
MBD3L3A6NE82 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC13.43□□□□□ -0.26
MBD3L3A6NE82 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
MBD3L3A6NE82 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
MBD3L3A6NE82 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
MBD3L3A6NE82 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
MBD3L3A6NE82 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC13.43□□□□□ -0.26
MBD3L3A6NE82 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
MBD3L3A6NE82 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
MBD3L3A6NE82 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
MBD3L3A6NE82 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
MBD3L3A6NE82 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
MBD3L3A6NE82 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
MBD3L3A6NE82 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
MBD3L3A6NE82 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
MBD3L3A6NE82 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
MBD3L3A6NE82 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
MBD3L3A6NE82 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
MBD3L3A6NE82 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
MBD3L3A6NE82 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
MBD3L3A6NE82 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
MBD3L3A6NE82 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
MBD3L3A6NE82 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
MBD3L3A6NE82 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
MBD3L3A6NE82 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC13.43□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 66.6 ms