Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
TCRBV3S1A0A5B6 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
TCRBV3S1A0A5B6 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC14.46□□□□□ -0.09
TCRBV3S1A0A5B6 AC002056.1-201ENST00000395613 760 ntBASIC14.46□□□□□ -0.09
TCRBV3S1A0A5B6 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC14.46□□□□□ -0.09
TCRBV3S1A0A5B6 AC098831.1-202ENST00000438821 336 ntBASIC14.46□□□□□ -0.09
TCRBV3S1A0A5B6 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC14.46□□□□□ -0.09
TCRBV3S1A0A5B6 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
TCRBV3S1A0A5B6 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
TCRBV3S1A0A5B6 KRT19P2-202ENST00000557173 1012 ntBASIC14.46□□□□□ -0.09
TCRBV3S1A0A5B6 NAA38-207ENST00000576861 556 ntTSL 3 BASIC14.46□□□□□ -0.09
TCRBV3S1A0A5B6 AC027307.2-201ENST00000591252 911 ntBASIC14.46□□□□□ -0.09
TCRBV3S1A0A5B6 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC14.46□□□□□ -0.09
TCRBV3S1A0A5B6 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC14.46□□□□□ -0.09
TCRBV3S1A0A5B6 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
TCRBV3S1A0A5B6 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
TCRBV3S1A0A5B6 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC14.46□□□□□ -0.09
TCRBV3S1A0A5B6 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TCRBV3S1A0A5B6 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
TCRBV3S1A0A5B6 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
TCRBV3S1A0A5B6 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC14.46□□□□□ -0.09
TCRBV3S1A0A5B6 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.09
TCRBV3S1A0A5B6 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
TCRBV3S1A0A5B6 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TCRBV3S1A0A5B6 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
TCRBV3S1A0A5B6 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
TCRBV3S1A0A5B6 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
TCRBV3S1A0A5B6 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
TCRBV3S1A0A5B6 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
TCRBV3S1A0A5B6 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC14.46□□□□□ -0.1
TCRBV3S1A0A5B6 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
TCRBV3S1A0A5B6 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
TCRBV3S1A0A5B6 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
TCRBV3S1A0A5B6 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
TCRBV3S1A0A5B6 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
TCRBV3S1A0A5B6 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
TCRBV3S1A0A5B6 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TCRBV3S1A0A5B6 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
TCRBV3S1A0A5B6 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC14.45□□□□□ -0.1
TCRBV3S1A0A5B6 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TCRBV3S1A0A5B6 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TCRBV3S1A0A5B6 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC14.45□□□□□ -0.1
TCRBV3S1A0A5B6 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC14.45□□□□□ -0.1
TCRBV3S1A0A5B6 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TCRBV3S1A0A5B6 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TCRBV3S1A0A5B6 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
TCRBV3S1A0A5B6 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
TCRBV3S1A0A5B6 ZBTB45P1-201ENST00000452761 1456 ntBASIC14.45□□□□□ -0.1
TCRBV3S1A0A5B6 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TCRBV3S1A0A5B6 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC14.45□□□□□ -0.1
TCRBV3S1A0A5B6 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TCRBV3S1A0A5B6 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC14.45□□□□□ -0.1
TCRBV3S1A0A5B6 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TCRBV3S1A0A5B6 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
TCRBV3S1A0A5B6 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TCRBV3S1A0A5B6 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TCRBV3S1A0A5B6 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
TCRBV3S1A0A5B6 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC14.45□□□□□ -0.1
TCRBV3S1A0A5B6 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TCRBV3S1A0A5B6 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TCRBV3S1A0A5B6 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TCRBV3S1A0A5B6 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC14.45□□□□□ -0.1
TCRBV3S1A0A5B6 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TCRBV3S1A0A5B6 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
TCRBV3S1A0A5B6 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC14.45□□□□□ -0.1
TCRBV3S1A0A5B6 CBR1-202ENST00000399191 838 ntTSL 3 BASIC14.45□□□□□ -0.1
TCRBV3S1A0A5B6 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
TCRBV3S1A0A5B6 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TCRBV3S1A0A5B6 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC14.45□□□□□ -0.1
TCRBV3S1A0A5B6 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC14.45□□□□□ -0.1
TCRBV3S1A0A5B6 AP002472.1-201ENST00000577490 586 ntBASIC14.45□□□□□ -0.1
TCRBV3S1A0A5B6 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TCRBV3S1A0A5B6 AC068137.2-201ENST00000605408 478 ntBASIC14.45□□□□□ -0.1
TCRBV3S1A0A5B6 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC14.45□□□□□ -0.1
TCRBV3S1A0A5B6 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC14.45□□□□□ -0.1
TCRBV3S1A0A5B6 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC14.45□□□□□ -0.1
TCRBV3S1A0A5B6 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC14.45□□□□□ -0.1
TCRBV3S1A0A5B6 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC14.45□□□□□ -0.1
TCRBV3S1A0A5B6 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
TCRBV3S1A0A5B6 DGCR9-201ENST00000609630 2415 ntBASIC14.45□□□□□ -0.1
TCRBV3S1A0A5B6 AC016397.2-201ENST00000624848 1985 ntBASIC14.45□□□□□ -0.1
TCRBV3S1A0A5B6 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TCRBV3S1A0A5B6 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC14.45□□□□□ -0.1
TCRBV3S1A0A5B6 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TCRBV3S1A0A5B6 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TCRBV3S1A0A5B6 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
TCRBV3S1A0A5B6 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TCRBV3S1A0A5B6 LSS-211ENST00000522411 2523 ntTSL 2 BASIC14.45□□□□□ -0.1
TCRBV3S1A0A5B6 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
TCRBV3S1A0A5B6 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TCRBV3S1A0A5B6 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC14.45□□□□□ -0.1
TCRBV3S1A0A5B6 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
TCRBV3S1A0A5B6 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TCRBV3S1A0A5B6 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TCRBV3S1A0A5B6 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC14.44□□□□□ -0.1
TCRBV3S1A0A5B6 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
TCRBV3S1A0A5B6 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC14.44□□□□□ -0.1
TCRBV3S1A0A5B6 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC14.44□□□□□ -0.1
TCRBV3S1A0A5B6 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TCRBV3S1A0A5B6 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms