Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
PCDHGA9Q9Y5G4 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PCDHGA9Q9Y5G4 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PCDHGA9Q9Y5G4 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
PCDHGA9Q9Y5G4 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC14.49□□□□□ -0.09
PCDHGA9Q9Y5G4 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC14.49□□□□□ -0.09
PCDHGA9Q9Y5G4 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC14.49□□□□□ -0.09
PCDHGA9Q9Y5G4 LOX-206ENST00000639739 1626 ntTSL 5 BASIC14.49□□□□□ -0.09
PCDHGA9Q9Y5G4 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
PCDHGA9Q9Y5G4 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC14.49□□□□□ -0.09
PCDHGA9Q9Y5G4 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PCDHGA9Q9Y5G4 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
PCDHGA9Q9Y5G4 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC14.49□□□□□ -0.09
PCDHGA9Q9Y5G4 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
PCDHGA9Q9Y5G4 TNRC18P2-201ENST00000417666 2714 ntBASIC14.49□□□□□ -0.09
PCDHGA9Q9Y5G4 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC14.49□□□□□ -0.09
PCDHGA9Q9Y5G4 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC14.49□□□□□ -0.09
PCDHGA9Q9Y5G4 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
PCDHGA9Q9Y5G4 ACKR1-201ENST00000368121 1240 ntBASIC14.49□□□□□ -0.09
PCDHGA9Q9Y5G4 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PCDHGA9Q9Y5G4 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
PCDHGA9Q9Y5G4 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC14.49□□□□□ -0.09
PCDHGA9Q9Y5G4 BCYRN1-201ENST00000418539 200 ntBASIC14.49□□□□□ -0.09
PCDHGA9Q9Y5G4 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC14.49□□□□□ -0.09
PCDHGA9Q9Y5G4 FTH1P14-201ENST00000482930 551 ntBASIC14.49□□□□□ -0.09
PCDHGA9Q9Y5G4 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC14.49□□□□□ -0.09
PCDHGA9Q9Y5G4 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC14.49□□□□□ -0.09
PCDHGA9Q9Y5G4 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC14.49□□□□□ -0.09
PCDHGA9Q9Y5G4 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
PCDHGA9Q9Y5G4 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC14.49□□□□□ -0.09
PCDHGA9Q9Y5G4 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC14.49□□□□□ -0.09
PCDHGA9Q9Y5G4 DUX4L45-201ENST00000566406 1057 ntBASIC14.49□□□□□ -0.09
PCDHGA9Q9Y5G4 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC14.49□□□□□ -0.09
PCDHGA9Q9Y5G4 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
PCDHGA9Q9Y5G4 AC010328.2-201ENST00000597698 1111 ntBASIC14.49□□□□□ -0.09
PCDHGA9Q9Y5G4 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC14.49□□□□□ -0.09
PCDHGA9Q9Y5G4 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC14.49□□□□□ -0.09
PCDHGA9Q9Y5G4 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC14.49□□□□□ -0.09
PCDHGA9Q9Y5G4 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
PCDHGA9Q9Y5G4 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PCDHGA9Q9Y5G4 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PCDHGA9Q9Y5G4 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PCDHGA9Q9Y5G4 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC14.49□□□□□ -0.09
PCDHGA9Q9Y5G4 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
PCDHGA9Q9Y5G4 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC14.49□□□□□ -0.09
PCDHGA9Q9Y5G4 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PCDHGA9Q9Y5G4 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
PCDHGA9Q9Y5G4 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC14.49□□□□□ -0.09
PCDHGA9Q9Y5G4 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
PCDHGA9Q9Y5G4 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC14.49□□□□□ -0.09
PCDHGA9Q9Y5G4 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
PCDHGA9Q9Y5G4 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC14.49□□□□□ -0.09
PCDHGA9Q9Y5G4 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC14.49□□□□□ -0.09
PCDHGA9Q9Y5G4 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
PCDHGA9Q9Y5G4 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC14.49□□□□□ -0.09
PCDHGA9Q9Y5G4 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
PCDHGA9Q9Y5G4 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC14.48□□□□□ -0.09
PCDHGA9Q9Y5G4 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
PCDHGA9Q9Y5G4 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
PCDHGA9Q9Y5G4 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
PCDHGA9Q9Y5G4 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PCDHGA9Q9Y5G4 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
PCDHGA9Q9Y5G4 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
PCDHGA9Q9Y5G4 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
PCDHGA9Q9Y5G4 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PCDHGA9Q9Y5G4 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PCDHGA9Q9Y5G4 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
PCDHGA9Q9Y5G4 AC112504.1-201ENST00000623415 1841 ntBASIC14.48□□□□□ -0.09
PCDHGA9Q9Y5G4 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC14.48□□□□□ -0.09
PCDHGA9Q9Y5G4 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
PCDHGA9Q9Y5G4 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
PCDHGA9Q9Y5G4 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC14.48□□□□□ -0.09
PCDHGA9Q9Y5G4 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PCDHGA9Q9Y5G4 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PCDHGA9Q9Y5G4 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
PCDHGA9Q9Y5G4 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PCDHGA9Q9Y5G4 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
PCDHGA9Q9Y5G4 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
PCDHGA9Q9Y5G4 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC14.48□□□□□ -0.09
PCDHGA9Q9Y5G4 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
PCDHGA9Q9Y5G4 KRT18P64-201ENST00000434946 1219 ntBASIC14.48□□□□□ -0.09
PCDHGA9Q9Y5G4 AC093433.1-201ENST00000458048 571 ntBASIC14.48□□□□□ -0.09
PCDHGA9Q9Y5G4 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
PCDHGA9Q9Y5G4 AC108725.1-201ENST00000495472 409 ntBASIC14.48□□□□□ -0.09
PCDHGA9Q9Y5G4 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC14.48□□□□□ -0.09
PCDHGA9Q9Y5G4 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
PCDHGA9Q9Y5G4 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC14.48□□□□□ -0.09
PCDHGA9Q9Y5G4 AL450472.2-201ENST00000603663 1156 ntBASIC14.48□□□□□ -0.09
PCDHGA9Q9Y5G4 AC244093.1-201ENST00000610837 814 ntBASIC14.48□□□□□ -0.09
PCDHGA9Q9Y5G4 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC14.48□□□□□ -0.09
PCDHGA9Q9Y5G4 AC005252.2-201ENST00000624630 1141 ntBASIC14.48□□□□□ -0.09
PCDHGA9Q9Y5G4 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC14.48□□□□□ -0.09
PCDHGA9Q9Y5G4 CICP4-201ENST00000447359 2812 ntBASIC14.48□□□□□ -0.09
PCDHGA9Q9Y5G4 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
PCDHGA9Q9Y5G4 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
PCDHGA9Q9Y5G4 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PCDHGA9Q9Y5G4 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
PCDHGA9Q9Y5G4 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PCDHGA9Q9Y5G4 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC14.48□□□□□ -0.09
PCDHGA9Q9Y5G4 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms