Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
PCDHB1Q9Y5F3 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
PCDHB1Q9Y5F3 ANKRD19P-201ENST00000338192 862 ntBASIC15.47■□□□□ 0.07
PCDHB1Q9Y5F3 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PCDHB1Q9Y5F3 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC15.47■□□□□ 0.07
PCDHB1Q9Y5F3 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC15.47■□□□□ 0.07
PCDHB1Q9Y5F3 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PCDHB1Q9Y5F3 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PCDHB1Q9Y5F3 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
PCDHB1Q9Y5F3 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PCDHB1Q9Y5F3 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC15.47■□□□□ 0.07
PCDHB1Q9Y5F3 KRT18P64-201ENST00000434946 1219 ntBASIC15.47■□□□□ 0.07
PCDHB1Q9Y5F3 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC15.47■□□□□ 0.07
PCDHB1Q9Y5F3 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC15.47■□□□□ 0.07
PCDHB1Q9Y5F3 BNIP3P42-201ENST00000454982 569 ntBASIC15.47■□□□□ 0.07
PCDHB1Q9Y5F3 KRT18P43-201ENST00000469825 1281 ntBASIC15.47■□□□□ 0.07
PCDHB1Q9Y5F3 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC15.47■□□□□ 0.07
PCDHB1Q9Y5F3 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
PCDHB1Q9Y5F3 BNIP3P29-201ENST00000598302 571 ntBASIC15.47■□□□□ 0.07
PCDHB1Q9Y5F3 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC15.47■□□□□ 0.07
PCDHB1Q9Y5F3 MIR8072-201ENST00000614241 80 ntBASIC15.47■□□□□ 0.07
PCDHB1Q9Y5F3 AC011447.5-201ENST00000616168 564 ntBASIC15.47■□□□□ 0.07
PCDHB1Q9Y5F3 AL033527.5-201ENST00000641382 801 ntBASIC15.47■□□□□ 0.07
PCDHB1Q9Y5F3 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
PCDHB1Q9Y5F3 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
PCDHB1Q9Y5F3 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
PCDHB1Q9Y5F3 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
PCDHB1Q9Y5F3 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
PCDHB1Q9Y5F3 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PCDHB1Q9Y5F3 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC15.47■□□□□ 0.07
PCDHB1Q9Y5F3 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC15.47■□□□□ 0.07
PCDHB1Q9Y5F3 CYP2AB1P-202ENST00000454440 1456 ntBASIC15.46■□□□□ 0.07
PCDHB1Q9Y5F3 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PCDHB1Q9Y5F3 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
PCDHB1Q9Y5F3 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
PCDHB1Q9Y5F3 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PCDHB1Q9Y5F3 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC15.46■□□□□ 0.07
PCDHB1Q9Y5F3 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
PCDHB1Q9Y5F3 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
PCDHB1Q9Y5F3 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC15.46■□□□□ 0.07
PCDHB1Q9Y5F3 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PCDHB1Q9Y5F3 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PCDHB1Q9Y5F3 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
PCDHB1Q9Y5F3 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
PCDHB1Q9Y5F3 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
PCDHB1Q9Y5F3 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
PCDHB1Q9Y5F3 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
PCDHB1Q9Y5F3 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PCDHB1Q9Y5F3 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.07
PCDHB1Q9Y5F3 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PCDHB1Q9Y5F3 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC15.46■□□□□ 0.07
PCDHB1Q9Y5F3 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC15.46■□□□□ 0.07
PCDHB1Q9Y5F3 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC15.46■□□□□ 0.07
PCDHB1Q9Y5F3 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PCDHB1Q9Y5F3 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC15.46■□□□□ 0.07
PCDHB1Q9Y5F3 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC15.46■□□□□ 0.07
PCDHB1Q9Y5F3 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PCDHB1Q9Y5F3 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC15.46■□□□□ 0.07
PCDHB1Q9Y5F3 PACS1-203ENST00000524815 628 ntTSL 4 BASIC15.46■□□□□ 0.07
PCDHB1Q9Y5F3 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
PCDHB1Q9Y5F3 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
PCDHB1Q9Y5F3 TIMM17BP1-201ENST00000545713 516 ntBASIC15.46■□□□□ 0.07
PCDHB1Q9Y5F3 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
PCDHB1Q9Y5F3 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC15.46■□□□□ 0.07
PCDHB1Q9Y5F3 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC15.46■□□□□ 0.07
PCDHB1Q9Y5F3 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
PCDHB1Q9Y5F3 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC15.46■□□□□ 0.07
PCDHB1Q9Y5F3 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PCDHB1Q9Y5F3 AC006058.4-201ENST00000624016 1670 ntBASIC15.46■□□□□ 0.07
PCDHB1Q9Y5F3 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC15.46■□□□□ 0.07
PCDHB1Q9Y5F3 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC15.46■□□□□ 0.07
PCDHB1Q9Y5F3 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
PCDHB1Q9Y5F3 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PCDHB1Q9Y5F3 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC15.46■□□□□ 0.07
PCDHB1Q9Y5F3 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC15.46■□□□□ 0.07
PCDHB1Q9Y5F3 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
PCDHB1Q9Y5F3 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.06
PCDHB1Q9Y5F3 STRN-202ENST00000379213 2254 ntTSL 5 BASIC15.46■□□□□ 0.06
PCDHB1Q9Y5F3 AMT-224ENST00000635808 1610 ntTSL 5 BASIC15.46■□□□□ 0.06
PCDHB1Q9Y5F3 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
PCDHB1Q9Y5F3 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.06
PCDHB1Q9Y5F3 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
PCDHB1Q9Y5F3 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
PCDHB1Q9Y5F3 CLK3P2-201ENST00000427566 1453 ntBASIC15.46■□□□□ 0.06
PCDHB1Q9Y5F3 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
PCDHB1Q9Y5F3 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC15.45■□□□□ 0.06
PCDHB1Q9Y5F3 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
PCDHB1Q9Y5F3 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PCDHB1Q9Y5F3 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
PCDHB1Q9Y5F3 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PCDHB1Q9Y5F3 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC15.45■□□□□ 0.06
PCDHB1Q9Y5F3 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC15.45■□□□□ 0.06
PCDHB1Q9Y5F3 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PCDHB1Q9Y5F3 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC15.45■□□□□ 0.06
PCDHB1Q9Y5F3 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PCDHB1Q9Y5F3 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
PCDHB1Q9Y5F3 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
PCDHB1Q9Y5F3 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PCDHB1Q9Y5F3 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
PCDHB1Q9Y5F3 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms