Protein–RNA interactions for Protein: Q9UMS6

SYNPO2, Synaptopodin-2, humanhuman

Predictions only

Length 1,093 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2Q9UMS6 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC17.57■□□□□ 0.4
SYNPO2Q9UMS6 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC17.57■□□□□ 0.4
SYNPO2Q9UMS6 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SYNPO2Q9UMS6 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC17.57■□□□□ 0.4
SYNPO2Q9UMS6 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC17.57■□□□□ 0.4
SYNPO2Q9UMS6 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SYNPO2Q9UMS6 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SYNPO2Q9UMS6 RN7SKP175-201ENST00000408472 289 ntBASIC17.57■□□□□ 0.4
SYNPO2Q9UMS6 GPAA1P2-201ENST00000417923 928 ntBASIC17.57■□□□□ 0.4
SYNPO2Q9UMS6 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
SYNPO2Q9UMS6 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC17.57■□□□□ 0.4
SYNPO2Q9UMS6 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC17.57■□□□□ 0.4
SYNPO2Q9UMS6 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
SYNPO2Q9UMS6 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC17.57■□□□□ 0.4
SYNPO2Q9UMS6 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC17.57■□□□□ 0.4
SYNPO2Q9UMS6 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC17.57■□□□□ 0.4
SYNPO2Q9UMS6 AL096828.3-201ENST00000615354 462 ntBASIC17.57■□□□□ 0.4
SYNPO2Q9UMS6 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SYNPO2Q9UMS6 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC17.57■□□□□ 0.4
SYNPO2Q9UMS6 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
SYNPO2Q9UMS6 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SYNPO2Q9UMS6 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
SYNPO2Q9UMS6 PES1-204ENST00000402284 2144 ntTSL 5 BASIC17.57■□□□□ 0.4
SYNPO2Q9UMS6 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC17.57■□□□□ 0.4
SYNPO2Q9UMS6 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SYNPO2Q9UMS6 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC17.57■□□□□ 0.4
SYNPO2Q9UMS6 C18orf15-201ENST00000623680 2534 ntBASIC17.57■□□□□ 0.4
SYNPO2Q9UMS6 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
SYNPO2Q9UMS6 API5-202ENST00000420461 2009 ntTSL 2 BASIC17.57■□□□□ 0.4
SYNPO2Q9UMS6 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SYNPO2Q9UMS6 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
SYNPO2Q9UMS6 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SYNPO2Q9UMS6 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
SYNPO2Q9UMS6 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SYNPO2Q9UMS6 LINC02199-201ENST00000506655 2702 ntBASIC17.56■□□□□ 0.4
SYNPO2Q9UMS6 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SYNPO2Q9UMS6 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
SYNPO2Q9UMS6 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SYNPO2Q9UMS6 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SYNPO2Q9UMS6 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
SYNPO2Q9UMS6 FKBP4P6-201ENST00000457486 1332 ntBASIC17.56■□□□□ 0.4
SYNPO2Q9UMS6 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC17.56■□□□□ 0.4
SYNPO2Q9UMS6 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC17.56■□□□□ 0.4
SYNPO2Q9UMS6 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
SYNPO2Q9UMS6 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SYNPO2Q9UMS6 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SYNPO2Q9UMS6 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SYNPO2Q9UMS6 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC17.56■□□□□ 0.4
SYNPO2Q9UMS6 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC17.56■□□□□ 0.4
SYNPO2Q9UMS6 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SYNPO2Q9UMS6 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
SYNPO2Q9UMS6 NDUFAB1P1-201ENST00000404262 460 ntBASIC17.56■□□□□ 0.4
SYNPO2Q9UMS6 MIR1247-201ENST00000408206 136 ntBASIC17.56■□□□□ 0.4
SYNPO2Q9UMS6 TISP43-201ENST00000409793 538 ntTSL 4 BASIC17.56■□□□□ 0.4
SYNPO2Q9UMS6 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
SYNPO2Q9UMS6 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
SYNPO2Q9UMS6 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC17.56■□□□□ 0.4
SYNPO2Q9UMS6 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SYNPO2Q9UMS6 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
SYNPO2Q9UMS6 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SYNPO2Q9UMS6 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC17.56■□□□□ 0.4
SYNPO2Q9UMS6 AC103810.3-201ENST00000583567 96 ntBASIC17.56■□□□□ 0.4
SYNPO2Q9UMS6 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC17.56■□□□□ 0.4
SYNPO2Q9UMS6 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SYNPO2Q9UMS6 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SYNPO2Q9UMS6 BID-213ENST00000615414 2236 ntTSL 5 BASIC17.56■□□□□ 0.4
SYNPO2Q9UMS6 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC17.56■□□□□ 0.4
SYNPO2Q9UMS6 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC17.56■□□□□ 0.4
SYNPO2Q9UMS6 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SYNPO2Q9UMS6 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SYNPO2Q9UMS6 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
SYNPO2Q9UMS6 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC17.56■□□□□ 0.4
SYNPO2Q9UMS6 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
SYNPO2Q9UMS6 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SYNPO2Q9UMS6 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SYNPO2Q9UMS6 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SYNPO2Q9UMS6 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SYNPO2Q9UMS6 C8orf49-201ENST00000525043 1968 ntBASIC17.55■□□□□ 0.4
SYNPO2Q9UMS6 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC17.55■□□□□ 0.4
SYNPO2Q9UMS6 SSR4P1-203ENST00000599569 2260 ntBASIC17.55■□□□□ 0.4
SYNPO2Q9UMS6 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
SYNPO2Q9UMS6 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
SYNPO2Q9UMS6 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SYNPO2Q9UMS6 F11R-206ENST00000621309 4770 ntTSL 5 BASIC17.55■□□□□ 0.4
SYNPO2Q9UMS6 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
SYNPO2Q9UMS6 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SYNPO2Q9UMS6 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SYNPO2Q9UMS6 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
SYNPO2Q9UMS6 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
SYNPO2Q9UMS6 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SYNPO2Q9UMS6 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC17.55■□□□□ 0.4
SYNPO2Q9UMS6 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SYNPO2Q9UMS6 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC17.55■□□□□ 0.4
SYNPO2Q9UMS6 ALG3P1-201ENST00000508806 1114 ntBASIC17.55■□□□□ 0.4
SYNPO2Q9UMS6 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
SYNPO2Q9UMS6 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC17.55■□□□□ 0.4
SYNPO2Q9UMS6 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC17.55■□□□□ 0.4
SYNPO2Q9UMS6 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC17.55■□□□□ 0.4
SYNPO2Q9UMS6 AC104982.3-201ENST00000581995 514 ntBASIC17.55■□□□□ 0.4
SYNPO2Q9UMS6 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms