Protein–RNA interactions for Protein: Q9UJU5

FOXD3, Forkhead box protein D3, humanhuman

Predicted RBP Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD3Q9UJU5 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
FOXD3Q9UJU5 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC13.83□□□□□ -0.2
FOXD3Q9UJU5 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
FOXD3Q9UJU5 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
FOXD3Q9UJU5 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
FOXD3Q9UJU5 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
FOXD3Q9UJU5 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC13.83□□□□□ -0.2
FOXD3Q9UJU5 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
FOXD3Q9UJU5 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
FOXD3Q9UJU5 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
FOXD3Q9UJU5 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
FOXD3Q9UJU5 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
FOXD3Q9UJU5 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
FOXD3Q9UJU5 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
FOXD3Q9UJU5 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
FOXD3Q9UJU5 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
FOXD3Q9UJU5 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
FOXD3Q9UJU5 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
FOXD3Q9UJU5 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
FOXD3Q9UJU5 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
FOXD3Q9UJU5 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
FOXD3Q9UJU5 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
FOXD3Q9UJU5 C18orf15-201ENST00000623680 2534 ntBASIC13.82□□□□□ -0.2
FOXD3Q9UJU5 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
FOXD3Q9UJU5 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
FOXD3Q9UJU5 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
FOXD3Q9UJU5 C1QBPP1-201ENST00000400117 770 ntBASIC13.82□□□□□ -0.2
FOXD3Q9UJU5 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC13.82□□□□□ -0.2
FOXD3Q9UJU5 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
FOXD3Q9UJU5 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC13.82□□□□□ -0.2
FOXD3Q9UJU5 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
FOXD3Q9UJU5 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC13.82□□□□□ -0.2
FOXD3Q9UJU5 FO681548.1-201ENST00000455617 1132 ntBASIC13.82□□□□□ -0.2
FOXD3Q9UJU5 AC119751.2-201ENST00000504529 210 ntBASIC13.82□□□□□ -0.2
FOXD3Q9UJU5 AC068587.3-201ENST00000526613 355 ntBASIC13.82□□□□□ -0.2
FOXD3Q9UJU5 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC13.82□□□□□ -0.2
FOXD3Q9UJU5 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
FOXD3Q9UJU5 AL359711.2-201ENST00000563105 872 ntBASIC13.82□□□□□ -0.2
FOXD3Q9UJU5 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC13.82□□□□□ -0.2
FOXD3Q9UJU5 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC13.82□□□□□ -0.2
FOXD3Q9UJU5 AC000095.1-201ENST00000603208 874 ntBASIC13.82□□□□□ -0.2
FOXD3Q9UJU5 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC13.82□□□□□ -0.2
FOXD3Q9UJU5 RPS24-214ENST00000613865 538 ntTSL 5 BASIC13.82□□□□□ -0.2
FOXD3Q9UJU5 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
FOXD3Q9UJU5 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
FOXD3Q9UJU5 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
FOXD3Q9UJU5 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
FOXD3Q9UJU5 MFF-204ENST00000353339 2186 ntTSL 5 BASIC13.82□□□□□ -0.2
FOXD3Q9UJU5 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
FOXD3Q9UJU5 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC13.82□□□□□ -0.2
FOXD3Q9UJU5 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
FOXD3Q9UJU5 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC13.82□□□□□ -0.2
FOXD3Q9UJU5 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC13.82□□□□□ -0.2
FOXD3Q9UJU5 TP73-209ENST00000603362 1668 ntTSL 5 BASIC13.82□□□□□ -0.2
FOXD3Q9UJU5 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
FOXD3Q9UJU5 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
FOXD3Q9UJU5 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
FOXD3Q9UJU5 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
FOXD3Q9UJU5 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC13.81□□□□□ -0.2
FOXD3Q9UJU5 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
FOXD3Q9UJU5 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
FOXD3Q9UJU5 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC13.81□□□□□ -0.2
FOXD3Q9UJU5 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
FOXD3Q9UJU5 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC13.81□□□□□ -0.2
FOXD3Q9UJU5 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC13.81□□□□□ -0.2
FOXD3Q9UJU5 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
FOXD3Q9UJU5 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
FOXD3Q9UJU5 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC13.81□□□□□ -0.2
FOXD3Q9UJU5 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
FOXD3Q9UJU5 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
FOXD3Q9UJU5 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
FOXD3Q9UJU5 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
FOXD3Q9UJU5 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
FOXD3Q9UJU5 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC13.81□□□□□ -0.2
FOXD3Q9UJU5 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
FOXD3Q9UJU5 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC13.81□□□□□ -0.2
FOXD3Q9UJU5 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
FOXD3Q9UJU5 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC13.81□□□□□ -0.2
FOXD3Q9UJU5 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC13.81□□□□□ -0.2
FOXD3Q9UJU5 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
FOXD3Q9UJU5 GZMB-202ENST00000382540 816 ntTSL 5 BASIC13.81□□□□□ -0.2
FOXD3Q9UJU5 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
FOXD3Q9UJU5 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
FOXD3Q9UJU5 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC13.81□□□□□ -0.2
FOXD3Q9UJU5 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
FOXD3Q9UJU5 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
FOXD3Q9UJU5 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC13.81□□□□□ -0.2
FOXD3Q9UJU5 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC13.81□□□□□ -0.2
FOXD3Q9UJU5 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC13.81□□□□□ -0.2
FOXD3Q9UJU5 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC13.81□□□□□ -0.2
FOXD3Q9UJU5 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC13.81□□□□□ -0.2
FOXD3Q9UJU5 LINC01922-201ENST00000562582 719 ntBASIC13.81□□□□□ -0.2
FOXD3Q9UJU5 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC13.81□□□□□ -0.2
FOXD3Q9UJU5 AC120045.2-201ENST00000567334 178 ntBASIC13.81□□□□□ -0.2
FOXD3Q9UJU5 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC13.81□□□□□ -0.2
FOXD3Q9UJU5 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
FOXD3Q9UJU5 UBL5-208ENST00000593087 320 ntTSL 3 BASIC13.81□□□□□ -0.2
FOXD3Q9UJU5 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC13.81□□□□□ -0.2
FOXD3Q9UJU5 AL049840.4-201ENST00000602422 811 ntBASIC13.81□□□□□ -0.2
FOXD3Q9UJU5 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 72.1 ms